Overview Annotation GWAS Evidence Associated genes

P29039

Metabolite ID
P29039
Deionized mass
562.2359 Da
Average m/z
563.2441
Average RT
15.6728
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.18G226300 hypothetical protein NA 5Chr18:51471540–51498344 (+)1.729e-11
Glyma.16G147900 hypothetical protein NA 4Chr16:30864919–30872425 (+)1.055e-13
Glyma.02G046600 hypothetical protein AT2G17820:HK1:histidine kinase 1 1Chr02:4276605–4283705 (-)6.959e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.504e-13
Glyma.03G119400 hypothetical protein AT5G43280:DCI1:delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 1Chr03:33050663–33053094 (+)5.338e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)7.359e-11
Glyma.08G111700 hypothetical protein NA 1Chr08:8604527–8606424 (-)1.57e-11
Glyma.12G079700 hypothetical protein AT1G08110:AT1G08110:lactoylglutathione lyase family protein / glyoxalase I family protein 1Chr12:6241940–6246776 (+)6.066e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)6.958e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)6.958e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)6.958e-12
Glyma.15G256300 hypothetical protein NA 1Chr15:48546007–48547401 (-)7.967e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.794e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.794e-11
Glyma.19G246100 hypothetical protein NA 1Chr19:49285339–49287223 (+)4.151e-11