Overview Annotation GWAS Evidence Associated genes

P29002

Metabolite ID
P29002
Deionized mass
506.3380 Da
Average m/z
507.3481
Average RT
15.6603
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G081600 hypothetical protein NA 1Chr02:7054190–7055955 (-)1.359e-11
Glyma.02G081900 hypothetical protein AT1G43650:UMAMIT22:nodulin MtN21 /EamA-like transporter family protein 1Chr02:7075646–7080163 (-)1.538e-11
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)8.134e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.643e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.643e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)5.643e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)5.643e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)8.938e-12
Glyma.14G212500 hypothetical protein AT3G02850:SKOR:STELAR K+ outward rectifier 1Chr14:47758067–47768578 (-)4.808e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.625e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.625e-11