Overview Annotation GWAS Evidence Associated genes

P28992

Metabolite ID
P28992
Deionized mass
938.4814 Da
Average m/z
470.2459
Average RT
15.6550
Adduct
[M+2H]2+
Association scope
Overlapping genes only
Associated genes
10
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

10 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G127000 hypothetical protein NA 1Chr08:9781692–9785219 (+)7.945e-17
Glyma.08G127700 hypothetical protein AT1G60890:AT1G60890:Phosphatidylinositol-4-phosphate 5-kinase family protein 1Chr08:9841320–9848294 (+)7.945e-17
Glyma.08G127800 hypothetical protein AT1G09580:AT1G09580:emp24/gp25L/p24 family/GOLD family protein 1Chr08:9855643–9858755 (+)7.945e-17
Glyma.08G128000 hypothetical protein NA 1Chr08:9868052–9869867 (+)7.945e-17
Glyma.08G128300 hypothetical protein AT1G11400:PYM:partner of Y14-MAGO 1Chr08:9891000–9894805 (+)6.166e-11
Glyma.08G129000 hypothetical protein NA 1Chr08:9931621–9939467 (-)6.166e-11
Glyma.09G178800 hypothetical protein AT5G52450:AT5G52450:MATE efflux family protein 1Chr09:40354319–40358609 (-)5.543e-11
Glyma.09G179000 hypothetical protein NA 1Chr09:40373197–40377187 (-)5.543e-11
Glyma.09G179500 hypothetical protein NA 1Chr09:40420404–40427085 (+)5.543e-11
Glyma.09G180300 hypothetical protein AT1G73760:AT1G73760:RING/U-box superfamily protein 1Chr09:40535877–40541369 (-)7.731e-13