Overview Annotation GWAS Evidence Associated genes

P28901

Metabolite ID
P28901
Deionized mass
188.1411 Da
Average m/z
189.1480
Average RT
15.6310
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G050900 COL16 NA 2Chr16:4874634–4878624 (+)1.44e-12
Glyma.03G020500 hypothetical protein AT2G45610:AT2G45610:alpha/beta-Hydrolases superfamily protein 1Chr03:2091153–2093117 (+)6.347e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.023e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)9.035e-11
Glyma.11G070700 hypothetical protein NA 1Chr11:5282926–5287258 (+)8.018e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.906e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.381e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)7.715e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.381e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.381e-11
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)1.369e-12
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)1.598e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)2.163e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)2.163e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.28e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.28e-11