Overview Annotation GWAS Evidence Associated genes

P28871

Metabolite ID
P28871
Deionized mass
411.2584 Da
Average m/z
412.2651
Average RT
15.6200
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)3.831e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)5.352e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)5.591e-11
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)8.142e-12
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)8.142e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)3.831e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)3.831e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)3.831e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)3.831e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)3.902e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)7.475e-11
Glyma.20G217500 hypothetical protein AT5G41950:AT5G41950:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:45312584–45322950 (-)5.297e-12