Overview Annotation GWAS Evidence Associated genes

P28798

Metabolite ID
P28798
Deionized mass
401.2458 Da
Average m/z
402.2528
Average RT
15.5907
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
22
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

22 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.581e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.581e-11
Glyma.02G074100 hypothetical protein AT5G13570:DCP2:decapping 2 1Chr02:6467452–6472617 (+)9.354e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)1.22e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)4.051e-11
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)2.829e-13
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)2.829e-13
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)5.721e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)7.772e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)5.419e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)4.842e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.987e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)2.987e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)2.987e-11
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)1.057e-11
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)5.818e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)4.783e-14
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)2.822e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)2.822e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)6.134e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)7.109e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)4.951e-11