Overview Annotation GWAS Evidence Associated genes

P28680

Metabolite ID
P28680
Deionized mass
596.2089 Da
Average m/z
597.2198
Average RT
15.5588
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
27
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

27 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 2Chr16:35831912–35835153 (+)2.132e-11
Glyma.04G190900 hypothetical protein AT5G63160:BT1:BTB and TAZ domain protein 1__AT3G48360:BT2:BTB and TAZ domain protein 2 1Chr04:46152356–46155245 (-)5.751e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)7.246e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.478e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.022e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.396e-11
Glyma.08G147500 hypothetical protein AT3G18680:AT3G18680:Amino acid kinase family protein 1Chr08:11253074–11256505 (+)6.697e-11
Glyma.08G149500 hypothetical protein NA 1Chr08:11460264–11465243 (-)1.847e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)5.335e-12
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)2.053e-11
Glyma.09G066300 hypothetical protein AT2G19400:AT2G19400:AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein 1Chr09:6487197–6498214 (-)7.374e-11
Glyma.09G066400 hypothetical protein AT4G29790:AT4G29790:serine/arginine repetitive matrix protein 1Chr09:6509441–6524102 (+)4.674e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)8.138e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)2.067e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)6.134e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)8.971e-13
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)6.134e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)6.134e-13
Glyma.15G257100 hypothetical protein AT1G56070:LOS1:Ribosomal protein S5/Elongation factor G/III/V family protein 1Chr15:48661607–48665946 (-)7.27e-12
Glyma.16G140000 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 1Chr16:29738375–29739010 (+)9.505e-11
Glyma.16G161500 hypothetical protein NA 1Chr16:32076715–32092322 (-)4.438e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)5.291e-11
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)1.336e-11
Glyma.18G213500 hypothetical protein AT2G38550:AT2G38550:Transmembrane proteins 14C 1Chr18:50044567–50050213 (-)4.618e-11
Glyma.18G247000 hypothetical protein NA 1Chr18:53433846–53444848 (-)6.757e-12
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)8.464e-12
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)2.158e-12