Overview Annotation GWAS Evidence Associated genes

P28628

Metabolite ID
P28628
Deionized mass
566.2055 Da
Average m/z
567.2132
Average RT
15.5460
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
16
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

16 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G122400 hypothetical protein NA 2Chr04:15651117–15669036 (+)1.525e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.105e-13
Glyma.03G169700 hypothetical protein AT2G20240:TRM17:GPI-anchored adhesin-like protein, putative (DUF3741)__AT4G28760:TRM20:methyl-coenzyme M reductase II s… 1Chr03:38442950–38448706 (+)2.232e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)7.607e-11
Glyma.04G112500 hypothetical protein AT5G56170:LLG1:LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 1Chr04:12607567–12609981 (+)5.547e-11
Glyma.04G112600 hypothetical protein AT5G56180:ARP8:actin-related protein 8 1Chr04:12610633–12620549 (-)5.547e-11
Glyma.04G114800 hypothetical protein AT1G55620:CLC-F:chloride channel F 1Chr04:13063675–13092388 (+)7.521e-11
Glyma.04G122600 hypothetical protein NA 1Chr04:15763721–15773690 (-)1.525e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.009e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.009e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)8.494e-12
Glyma.08G227900 hypothetical protein NA 1Chr08:18551920–18567339 (-)1.567e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)5.362e-11
Glyma.12G028800 hypothetical protein AT1G50300:TAF15:TBP-associated factor 15 1Chr12:2148313–2153234 (-)8.946e-11
Glyma.18G079000 hypothetical protein NA 1Chr18:7595306–7600287 (-)9.565e-12
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)9.209e-12