Overview Annotation GWAS Evidence Associated genes

P28524

Metabolite ID
P28524
Deionized mass
746.2601 Da
Average m/z
747.2702
Average RT
15.5234
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
17
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

17 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G136900 hypothetical protein NA 3Chr07:16234861–16240776 (+)6.412e-11
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)7.585e-14
Glyma.03G202700 hypothetical protein AT5G16280:AT5G16280:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr03:41108071–41128352 (+)3.44e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)2.518e-15
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)2.275e-13
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)3.678e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)9.501e-11
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)2.462e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)3.249e-11
Glyma.16G024600 hypothetical protein AT1G01320:AT1G01320:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:2374161–2391216 (-)2.883e-11
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 1Chr16:2407161–2410997 (-)2.231e-12
Glyma.16G115800 hypothetical protein NA 1Chr16:25719040–25728740 (-)5.646e-12
Glyma.16G138500 hypothetical protein NA 1Chr16:29564872–29566190 (+)3.884e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)9.636e-13
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)2.66e-13
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)2.66e-13
Glyma.17G118900 hypothetical protein NA 1Chr17:9401882–9402864 (+)4.416e-12