Overview Annotation GWAS Evidence Associated genes

P28458

Metabolite ID
P28458
Deionized mass
476.2236 Da
Average m/z
477.2321
Average RT
15.5046
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
5
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

5 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)3.528e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.414e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)5.179e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)3.528e-11
Glyma.18G273000 hypothetical protein NA 1Chr18:55575628–55582063 (-)4.647e-13