Overview Annotation GWAS Evidence Associated genes

P28385

Metabolite ID
P28385
Deionized mass
678.3071 Da
Average m/z
340.1616
Average RT
15.4854
Adduct
[M+2H]2+
Association scope
Overlapping genes only
Associated genes
7
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

7 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G188900 hypothetical protein NA 1Chr04:45982982–45986148 (+)6.124e-11
Glyma.06G034100 hypothetical protein AT1G19330:AT1G19330:histone deacetylase complex subunit__AT1G75060:AT1G75060:histone deacetylase complex subunit 1Chr06:2634621–2638042 (+)5.765e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.398e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)9.176e-12
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)9.199e-15
Glyma.09G272300 hypothetical protein AT5G01950:AT5G01950:Leucine-rich repeat protein kinase family protein 1Chr09:48873276–48883421 (-)1.906e-11
Glyma.09G272800 hypothetical protein AT3G08670:AT3G08670:serine/arginine repetitive matrix-like protein 1Chr09:48916725–48921396 (+)1.906e-11