Overview Annotation GWAS Evidence Associated genes

P28373

Metabolite ID
P28373
Deionized mass
706.3019 Da
Average m/z
354.1587
Average RT
15.4824
Adduct
[M+2H]2+
Association scope
Overlapping genes only
Associated genes
9
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

9 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G182900 Serine/Threonine-kinase ATM-like protein AT3G48190:ATM:Serine/Threonine-kinase ATM-like protein 8Chr04:44928224–45022945 (+)6.128e-14
Glyma.04G180900 hypothetical protein NA 2Chr04:44665725–44672557 (-)2.999e-29
Glyma.04G181000 hypothetical protein AT3G48010:CNGC16:cyclic nucleotide-gated channel 16 2Chr04:44693761–44700920 (+)2.234e-16
Glyma.04G181100 hypothetical protein NA 1Chr04:44704411–44709036 (+)6.128e-14
Glyma.04G181400 hypothetical protein NA 1Chr04:44740548–44745577 (+)6.128e-14
Glyma.04G182000 hypothetical protein AT1G27510:EX2:UvrB/UvrC domain protein (DUF3506) 1Chr04:44813809–44819555 (-)6.128e-14
Glyma.04G182700 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 1Chr04:44913268–44918651 (+)6.128e-14
Glyma.04G183500 hypothetical protein NA 1Chr04:45150392–45155226 (+)6.128e-14
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)6.381e-11