Overview Annotation GWAS Evidence Associated genes

P28317

Metabolite ID
P28317
Deionized mass
470.1508 Da
Average m/z
471.1556
Average RT
15.4687
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
26
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

26 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G021600 hypothetical protein AT5G65540:AT5G65540:transcription initiation factor TFIID subunit 1Chr01:2189923–2194362 (-)9.808e-11
Glyma.01G022300 hypothetical protein NA 1Chr01:2215383–2217438 (+)9.896e-12
Glyma.01G022800 hypothetical protein AT5G65490:AT5G65490:suppressor-like protein 1Chr01:2296901–2303966 (+)6.953e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.359e-12
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)1.359e-12
Glyma.08G137600 hypothetical protein AT4G39780:AT4G39780:Integrase-type DNA-binding superfamily protein 1Chr08:10551821–10553620 (-)4.259e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)5.273e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)3.7e-11
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)3.274e-11
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)3.791e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)3.791e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)1.02e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)4.042e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)4.042e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)4.042e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)4.042e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.699e-11
Glyma.11G237700 hypothetical protein NA 1Chr11:33203513–33233708 (-)8.687e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)2.492e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)1.977e-11
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)2.594e-21
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)3.791e-13
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)9.225e-13
Glyma.14G072200 Ipk1 AT5G42810:IPK1:inositol-pentakisphosphate 2-kinase 1__AT1G22100:AT1G22100:Inositol-pentakisphosphate 2-kinase family pr… 1Chr14:6059598–6063755 (-)9.64e-13
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)1.158e-11
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)1.833e-13