Overview Annotation GWAS Evidence Associated genes

P28312

Metabolite ID
P28312
Deionized mass
202.1701 Da
Average m/z
203.1777
Average RT
15.4674
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
7
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

7 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.165e-12
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)1.728e-11
Glyma.05G164800 hypothetical protein NA 1Chr05:35549831–35557199 (-)3.921e-11
Glyma.05G165300 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr05:35593651–35600917 (+)7.054e-11
Glyma.13G250400 NES nerol synthase NA 1Chr13:35790067–35794185 (-)2.079e-14
Glyma.13G250700 hypothetical protein AT1G16170:AT1G16170:ephrin-A3 protein 1Chr13:35806195–35808484 (-)4.188e-12
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr19:41018746–41025024 (+)7.773e-11