Overview Annotation GWAS Evidence Associated genes

P28138

Metabolite ID
P28138
Deionized mass
164.1196 Da
Average m/z
165.1261
Average RT
15.4148
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
30
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

30 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 2Chr16:35831912–35835153 (+)6.912e-13
Glyma.05G233500 hypothetical protein NA 1Chr05:41066769–41067350 (-)9.4e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.635e-15
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.142e-20
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)8.764e-13
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)2.823e-13
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)3.198e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)2.823e-13
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)2.823e-13
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)3.198e-11
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)4.315e-13
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)9.207e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)5.713e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)5.712e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)9.663e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)9.663e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 1Chr13:24677399–24693129 (-)5.507e-11
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)5.507e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.237e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.237e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)2.237e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)2.237e-12
Glyma.15G009700 hypothetical protein NA 1Chr15:751766–753795 (+)7.391e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)5.869e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.497e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)5.869e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)5.869e-12
Glyma.16G161500 hypothetical protein NA 1Chr16:32076715–32092322 (-)4.493e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)4.656e-14
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)2.6e-12