Overview Annotation GWAS Evidence Associated genes

P28018

Metabolite ID
P28018
Deionized mass
496.2354 Da
Average m/z
497.2440
Average RT
15.3803
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
12
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

12 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.758e-13
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.262e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)5.547e-13
Glyma.13G067800 hypothetical protein AT5G15020:SNL2:SIN3-like 2 1Chr13:16765722–16775985 (+)8.24e-12
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.133e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)4.259e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.13e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)4.259e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)4.259e-12
Glyma.16G161500 hypothetical protein NA 1Chr16:32076715–32092322 (-)9.231e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr16:35831912–35835153 (+)3.007e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)2.716e-15