Overview Annotation GWAS Evidence Associated genes

P28007

Metabolite ID
P28007
Deionized mass
504.3264 Da
Average m/z
505.3325
Average RT
15.3780
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
10
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

10 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G230400 hypothetical protein AT2G40935:AT2G40935:PLAC8 family protein 1Chr01:55782953–55786502 (+)2.886e-11
Glyma.01G230800 hypothetical protein AT4G10050:AT4G10050:esterase/lipase/thioesterase family protein 1Chr01:55803995–55808033 (+)3.097e-12
Glyma.01G231400 hypothetical protein AT4G25340:FKBP53:FK506 BINDING PROTEIN 53 1Chr01:55836387–55840615 (+)3.019e-14
Glyma.01G231700 hypothetical protein AT4G10180:DET1:light-mediated development protein 1 / deetiolated1 (DET1) 1Chr01:55856415–55863866 (+)1.422e-12
Glyma.01G231900 hypothetical protein AT1G71500:AT1G71500:Rieske (2Fe-2S) domain-containing protein 1Chr01:55869836–55872417 (+)7.03e-14
Glyma.01G234100 hypothetical protein AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein 1Chr01:56022128–56026001 (+)4.89e-11
Glyma.14G013500 hypothetical protein AT4G25434:NUDT10:nudix hydrolase homolog 10 1Chr14:1009519–1014238 (+)6.694e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.909e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.838e-11
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)7.276e-11