Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P27972

Metabolite ID
P27972
Deionized mass
337.1572 Da
Average m/z
338.1655
Average RT
15.3691
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
59
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

59 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)4.596e-20
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.345e-13
Glyma.09G053800 hypothetical protein NA 2Chr09:4737413–4755632 (-)2.587e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)2.766e-13
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)1.971e-14
Glyma.16G139000 hypothetical protein NA 2Chr16:29623540–29631451 (+)1.396e-12
Glyma.16G145100 hypothetical protein NA 2Chr16:30578388–30581421 (-)8.395e-16
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 2Chr16:30652378–30659548 (+)8.394e-16
Glyma.03G016700 hypothetical protein AT4G00740:QUA3:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr03:1683395–1688893 (-)9.284e-11
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)2.618e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)5.211e-13
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)2.857e-13
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)6.038e-11
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)6.038e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.345e-13
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.345e-13
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)4.18e-12
Glyma.09G011700 hypothetical protein NA 1Chr09:894858–897607 (-)3.104e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)3.43e-14
Glyma.09G169400 hypothetical protein NA 1Chr09:39398732–39401341 (-)4.528e-11
Glyma.11G095000 hypothetical protein NA 1Chr11:7206492–7209711 (-)1.061e-14
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)7.55e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)3.062e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.971e-14
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)4.028e-13
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)3.957e-11
Glyma.12G228000 hypothetical protein AT1G53210:AT1G53210:sodium/calcium exchanger family protein / calcium-binding EF hand family protein 1Chr12:38789187–38797498 (+)7.631e-11
Glyma.13G081100 hypothetical protein NA 1Chr13:18881427–18886462 (-)9.147e-11
Glyma.13G136500 hypothetical protein NA 1Chr13:24910198–24916336 (-)4.049e-11
Glyma.13G138300 hypothetical protein AT2G37130:AT2G37130:Peroxidase superfamily protein 1Chr13:25095882–25099473 (-)2.363e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)7.165e-12
Glyma.15G024400 hypothetical protein AT1G17620:AT1G17620:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr15:1962152–1963820 (+)1.426e-11
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)7.45e-12
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)7.45e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)9.746e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)9.747e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)9.747e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)5.124e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)7.027e-12
Glyma.16G041800 hypothetical protein NA 1Chr16:3914214–3917387 (-)5.618e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)7.085e-11
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)4.944e-11
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)1.435e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)2.571e-14
Glyma.16G140000 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 1Chr16:29738375–29739010 (+)2.496e-11
Glyma.16G142100 hypothetical protein NA 1Chr16:30045141–30049963 (+)2.951e-11
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)1.422e-16
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)5.535e-12
Glyma.16G144200 hypothetical protein AT3G50380:AT3G50380:vacuolar protein sorting-associated protein, putative (DUF1162) 1Chr16:30434508–30475458 (-)3.913e-11
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)1.627e-13
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)1.794e-11
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)2.719e-13
Glyma.16G147400 hypothetical protein NA 1Chr16:30817535–30821568 (+)3.999e-11
Glyma.16G161500 hypothetical protein NA 1Chr16:32076715–32092322 (-)5.336e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)2.037e-11
Glyma.18G091600 hypothetical protein NA 1Chr18:9165090–9166656 (-)8.538e-11
Glyma.18G202100 hypothetical protein AT3G51850:CPK13:calcium-dependent protein kinase 13 1Chr18:48258271–48266554 (-)2.773e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)4.12e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)2.531e-11