Overview Annotation GWAS Evidence Associated genes

P27878

Metabolite ID
P27878
Deionized mass
180.1128 Da
Average m/z
181.1203
Average RT
15.3321
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
5
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

5 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G046200 hypothetical protein NA 1Chr03:5895672–5899267 (+)9.19e-11
Glyma.13G185400 hypothetical protein NA 1Chr13:29936606–29937420 (+)2.906e-11
Glyma.15G124200 hypothetical protein AT1G50500:HIT1:Membrane trafficking VPS53 family protein 1Chr15:9861709–9873220 (+)1.882e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.546e-13
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)2.935e-13