Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P27760

Metabolite ID
P27760
Deionized mass
416.2377 Da
Average m/z
417.2444
Average RT
15.2954
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
46
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

46 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)1.443e-15
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)8.959e-17
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)8.958e-17
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)8.958e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)8.958e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)1.103e-11
Glyma.03G001400 hypothetical protein AT2G38610:AT2G38610:RNA-binding KH domain-containing protein 1Chr03:160599–165525 (+)7.513e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)1.798e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.095e-13
Glyma.03G037300 hypothetical protein NA 1Chr03:4566741–4573890 (+)4.078e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)9.501e-11
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)2.396e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.167e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.204e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.204e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.204e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)8.952e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)8.991e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.822e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)7.74e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)7.74e-12
Glyma.06G284900 BZIP50 bZIP transcription factor bZIP50 AT3G58120:BZIP61:Basic-leucine zipper (bZIP) transcription factor family protein__AT2G42380:BZIP34:Basic-leucine zipper… 1Chr06:47339957–47343650 (-)8.977e-16
Glyma.08G104000 hypothetical protein NA 1Chr08:7976043–7980358 (+)9.375e-11
Glyma.08G104400 hypothetical protein NA 1Chr08:8016766–8018606 (-)8.488e-11
Glyma.08G104500 hypothetical protein AT1G27385:AT1G27385:phosphoribosylformylglycinamidine synthase 1Chr08:8041175–8044478 (+)8.488e-11
Glyma.08G118500 hypothetical protein NA 1Chr08:9161382–9162471 (+)2.288e-11
Glyma.12G196800 hypothetical protein AT4G15180:SDG2:SET domain protein 2 1Chr12:35784957–35801339 (+)9.164e-12
Glyma.12G197600 hypothetical protein AT4G03210:XTH9:xyloglucan endotransglucosylase/hydrolase 9 1Chr12:35879106–35881779 (+)2.541e-13
Glyma.12G199800 hypothetical protein NA 1Chr12:36119518–36121636 (-)5.757e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.443e-15
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)5.604e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)5.604e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)8.959e-17
Glyma.13G180300 hypothetical protein NA 1Chr13:29378090–29379784 (-)4.758e-11
Glyma.13G184500 hypothetical protein NA 1Chr13:29829471–29834027 (+)1.531e-12
Glyma.13G201300 hypothetical protein NA 1Chr13:31497499–31499001 (+)6.673e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)9.519e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)3.067e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.067e-11
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)4.927e-11
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)4.927e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)3.309e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.083e-12
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)6.907e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.944e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.944e-12