Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P27702

Metabolite ID
P27702
Deionized mass
439.2280 Da
Average m/z
440.2386
Average RT
15.2862
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
71
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

71 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 2Chr03:1875182–1876855 (+)2.187e-11
Glyma.05G182500 hypothetical protein AT5G65210:TGA1:bZIP transcription factor family protein 2Chr05:37029299–37037313 (+)3.744e-13
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 2Chr08:9198213–9201688 (-)1.162e-14
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 2Chr08:9435391–9437279 (+)1.459e-15
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.749e-15
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)3.059e-12
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.4e-13
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)6.837e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)9.059e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.558e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)2.223e-11
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)9.682e-11
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)2.256e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)3.435e-14
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)3.186e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)2.333e-14
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)3.727e-14
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)3.727e-14
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)5.778e-16
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.713e-15
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.713e-15
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.713e-15
Glyma.05G182100 hypothetical protein NA 1Chr05:37003489–37004855 (-)3.435e-11
Glyma.05G182900 hypothetical protein NA 1Chr05:37056753–37057349 (-)3.744e-13
Glyma.05G183100 hypothetical protein AT5G64940:ATH13:ABC2 homolog 13 1Chr05:37059525–37070146 (-)3.744e-13
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)1.036e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.213e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.416e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.416e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.416e-11
Glyma.06G284900 BZIP50 bZIP transcription factor bZIP50 AT3G58120:BZIP61:Basic-leucine zipper (bZIP) transcription factor family protein__AT2G42380:BZIP34:Basic-leucine zipper… 1Chr06:47339957–47343650 (-)1.961e-12
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)8.885e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)8.885e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)8.885e-11
Glyma.08G118500 hypothetical protein NA 1Chr08:9161382–9162471 (+)9.03e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.749e-15
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.749e-15
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.749e-15
Glyma.08G338200 hypothetical protein NA 1Chr08:45509289–45511145 (+)3.702e-11
Glyma.08G338600 hypothetical protein NA 1Chr08:45522321–45523727 (-)3.702e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)3.702e-11
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)6.023e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)3.871e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)5.593e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)5.593e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.86e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.86e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.959e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)2.959e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)2.959e-11
Glyma.13G170600 ALDH2B6 aldehyde dehydrogenase family 2 member B6 AT1G23800:ALDH2B7:aldehyde dehydrogenase 2B7 1Chr13:28436396–28440865 (-)1.219e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.957e-11
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)1.686e-11
Glyma.14G133600 hypothetical protein AT4G31390:ACDO1:Protein kinase superfamily protein 1Chr14:23182134–23193763 (+)5.031e-11
Glyma.14G134600 hypothetical protein AT4G31450:AT4G31450:RING/U-box superfamily protein 1Chr14:23491895–23497735 (-)8.502e-12
Glyma.14G135400 hypothetical protein AT2G24570:WRKY17:WRKY DNA-binding protein 17 1Chr14:23729201–23732285 (-)5.361e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)3.059e-12
Glyma.14G149000 hypothetical protein NA 1Chr14:32164321–32167686 (+)7.345e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.4e-13
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)1.798e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)3.878e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)7.272e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)6.306e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.41e-11
Glyma.16G160900 hypothetical protein NA 1Chr16:32013447–32016235 (+)3.003e-11
Glyma.16G166900 hypothetical protein NA 1Chr16:32619260–32629262 (-)1.374e-11
Glyma.18G039500 hypothetical protein AT5G37770:TCH2:EF hand calcium-binding protein family 1Chr18:3218263–3219353 (+)3.747e-11
Glyma.18G050100 hypothetical protein NA 1Chr18:4323734–4329696 (+)2.88e-11
Glyma.19G119100 hypothetical protein AT3G03650:EDA5:Exostosin family protein 1Chr19:37668759–37672434 (+)4.807e-12
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)4.035e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)2.307e-12