Overview Annotation GWAS Evidence Associated genes

P27653

Metabolite ID
P27653
Deionized mass
382.2321 Da
Average m/z
383.2394
Average RT
15.2770
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
32
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

32 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G254100 hypothetical protein NA 2Chr02:44105026–44108824 (+)9.327e-11
Glyma.01G099100 hypothetical protein NA 1Chr01:33017228–33023840 (+)5.282e-11
Glyma.01G099600 hypothetical protein AT3G53930:AT3G53930:Protein kinase superfamily protein__AT2G37840:AT2G37840:Protein kinase superfamily protein 1Chr01:33115843–33125726 (-)5.282e-11
Glyma.01G099900 hypothetical protein NA 1Chr01:33275414–33282430 (+)5.282e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)8.297e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)8.297e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)3.768e-11
Glyma.02G253900 hypothetical protein AT2G39920:AT2G39920:HAD superfamily, subfamily IIIB acid phosphatase 1Chr02:44093225–44096543 (-)9.327e-11
Glyma.02G254200 hypothetical protein AT5G05790:AT5G05790:Duplicated homeodomain-like superfamily protein__AT3G11280:AT3G11280:Duplicated homeodomain-like su… 1Chr02:44112232–44114503 (+)9.327e-11
Glyma.02G254500 hypothetical protein AT2G39960:AT2G39960:Microsomal signal peptidase 25 kDa subunit (SPC25) 1Chr02:44151303–44155647 (-)9.327e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.565e-11
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)3.676e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)5.283e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)5.124e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)5.124e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)5.124e-11
Glyma.05G164700 hypothetical protein NA 1Chr05:35543931–35549196 (-)5.32e-11
Glyma.05G166800 SHOOT1 SHOOT1 protein AT1G55480:ZKT:protein containing PDZ domain, a K-box domain, and a TPR region 1Chr05:35731069–35735416 (+)4.072e-12
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)1.163e-12
Glyma.06G283200 hypothetical protein NA 1Chr06:47114654–47119627 (-)3.358e-11
Glyma.06G283600 hypothetical protein NA 1Chr06:47144786–47149722 (+)3.358e-11
Glyma.08G183700 Fasciclin-like arabinogalactan protein 19 NA 1Chr08:14738283–14742033 (+)4.277e-11
Glyma.08G184300 hypothetical protein NA 1Chr08:14784345–14786953 (+)8.315e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)5.678e-11
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)5.423e-11
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)5.423e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)9.695e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)5.943e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)4.746e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.439e-11
Glyma.18G179200 hypothetical protein NA 1Chr18:43222934–43228759 (-)1.03e-12
Glyma.20G099200 hypothetical protein AT3G55410:AT3G55410:2-oxoglutarate dehydrogenase, E1 component__AT5G65750:AT5G65750:2-oxoglutarate dehydrogenase, E1 co… 1Chr20:34242852–34248956 (-)5.261e-11