Overview Annotation GWAS Evidence Associated genes

P27620

Metabolite ID
P27620
Deionized mass
388.1277 Da
Average m/z
389.1354
Average RT
15.2679
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
17
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

17 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)4.451e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)4.451e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.425e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)9.781e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)9.781e-11
Glyma.05G166400 hypothetical protein NA 1Chr05:35692494–35699192 (+)1.47e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)8.988e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)8.988e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.451e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.425e-11
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)2.547e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)6.746e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.926e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)6.871e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)9.369e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)5.615e-17
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)1.9e-11