Overview Annotation GWAS Evidence Associated genes

P27543

Metabolite ID
P27543
Deionized mass
172.1442 Da
Average m/z
345.2970
Average RT
15.2477
Adduct
[2M+H]+
Association scope
Overlapping genes only
Associated genes
20
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

20 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G171600 hypothetical protein NA 1Chr01:50884031–50885430 (-)9.411e-11
Glyma.01G176700 hypothetical protein AT5G39350:AT5G39350:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr01:51335452–51340475 (+)9.411e-11
Glyma.01G228500 hypothetical protein AT3G16090:Hrd1A:RING/U-box superfamily protein__AT1G65040:Hrd1B:RING/U-box superfamily protein 1Chr01:55648318–55653661 (+)9.411e-11
Glyma.01G235300 hypothetical protein AT1G05470:CVP2:DNAse I-like superfamily protein 1Chr01:56116960–56121898 (-)9.411e-11
Glyma.01G241300 hypothetical protein AT1G50030:TOR:target of rapamycin 1Chr01:56488899–56535775 (+)9.411e-11
Glyma.02G027000 hypothetical protein NA 1Chr02:2445405–2446914 (-)9.411e-11
Glyma.02G045400 hypothetical protein NA 1Chr02:4181867–4186699 (+)6.078e-11
Glyma.05G225100 hypothetical protein AT4G29230:NAC075:NAC domain containing protein 75 1Chr05:40387813–40393404 (+)9.411e-11
Glyma.05G225700 hypothetical protein AT4G29350:PFN2:profilin 2__AT2G19760:PRF1:profilin 1 1Chr05:40432149–40439631 (+)9.411e-11
Glyma.05G226100 hypothetical protein NA 1Chr05:40466087–40467810 (-)9.411e-11
Glyma.05G230200 hypothetical protein NA 1Chr05:40815058–40819434 (+)9.411e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)9.411e-11
Glyma.08G043900 hypothetical protein NA 1Chr08:3458488–3466169 (+)9.411e-11
Glyma.10G017700 hypothetical protein AT4G02390:PARP2:poly(ADP-ribose) polymerase 1Chr10:1546393–1552506 (+)9.411e-11
Glyma.10G236900 hypothetical protein AT3G48880:AT3G48880:RNI-like superfamily protein 1Chr10:46571852–46575791 (+)9.411e-11
Glyma.10G253100 hypothetical protein NA 1Chr10:48074590–48077928 (+)9.411e-11
Glyma.10G267000 hypothetical protein AT1G15140:AT1G15140:FAD/NAD(P)-binding oxidoreductase 1Chr10:49015643–49018864 (-)9.411e-11
Glyma.12G213900 hypothetical protein NA 1Chr12:37310637–37312496 (-)9.411e-11
Glyma.12G214200 hypothetical protein AT4G04790:AT4G04790:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr12:37351424–37363980 (+)9.411e-11
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)9.411e-11