Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P27515

Metabolite ID
P27515
Deionized mass
326.2807 Da
Average m/z
327.2866
Average RT
15.2400
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.07G080900 hypothetical protein NA 5Chr07:7381339–7405785 (+)6.86e-11
Glyma.02G026300 MYB138 MYB transcription factor MYB138 NA 2Chr02:2350461–2352857 (-)1.767e-11
Glyma.05G124500 hypothetical protein NA 2Chr05:31794654–31796879 (+)3.367e-11
Glyma.05G124700 hypothetical protein NA 2Chr05:31807311–31817648 (+)3.367e-11
Glyma.05G125700 hypothetical protein AT1G48050:KU80:Ku80 family protein 2Chr05:31886478–31894299 (+)3.367e-11
Glyma.05G133700 hypothetical protein AT2G17120:LYM2:lysm domain GPI-anchored protein 2 2Chr05:32660003–32663094 (+)3.367e-11
Glyma.05G133800 hypothetical protein AT4G20040:AT4G20040:Pectin lyase-like superfamily protein 2Chr05:32665713–32670694 (-)3.367e-11
Glyma.12G091000 hypothetical protein NA 2Chr12:7440031–7442766 (+)8.838e-27
Glyma.14G220600 hypothetical protein AT1G75880:AT1G75880:SGNH hydrolase-type esterase superfamily protein 2Chr14:48558601–48564791 (+)4.649e-12
Glyma.02G026100 hypothetical protein NA 1Chr02:2336092–2341551 (-)1.767e-11
Glyma.05G124200 hypothetical protein AT4G20790:AT4G20790:Leucine-rich repeat protein kinase family protein 1Chr05:31776906–31778608 (-)3.367e-11
Glyma.05G124300 hypothetical protein NA 1Chr05:31779502–31780254 (+)3.367e-11
Glyma.05G125000 hypothetical protein NA 1Chr05:31842343–31844105 (+)3.367e-11
Glyma.05G125100 hypothetical protein NA 1Chr05:31845563–31850298 (+)3.367e-11
Glyma.05G125400 hypothetical protein NA 1Chr05:31865062–31866550 (+)3.367e-11
Glyma.05G125500 hypothetical protein NA 1Chr05:31867390–31870293 (+)3.367e-11
Glyma.05G125600 hypothetical protein AT4G20830:AT4G20830:FAD-binding Berberine family protein 1Chr05:31872915–31876376 (+)3.367e-11
Glyma.05G127700 hypothetical protein AT2G34410:RWA3:O-acetyltransferase family protein 1Chr05:32105041–32112429 (+)3.367e-11
Glyma.05G132600 hypothetical protein AT1G31020:TO2:thioredoxin O2 1Chr05:32557392–32560592 (+)3.367e-11
Glyma.05G133400 hypothetical protein AT1G48100:AT1G48100:Pectin lyase-like superfamily protein 1Chr05:32639275–32645811 (+)3.367e-11
Glyma.05G133900 hypothetical protein AT2G39080:EMB2799:NAD(P)-binding Rossmann-fold superfamily protein 1Chr05:32677682–32682271 (-)2.459e-12
Glyma.05G134000 hypothetical protein AT1G30950:UFO:F-box family protein 1Chr05:32687186–32688478 (-)3.367e-11
Glyma.05G134300 hypothetical protein AT3G47630:AT3G47630:translocator assembly/maintenance protein 1Chr05:32701637–32706863 (+)2.459e-12
Glyma.05G134400 hypothetical protein NA 1Chr05:32708277–32711579 (-)3.367e-11
Glyma.05G134500 hypothetical protein NA 1Chr05:32716137–32720056 (-)2.459e-12
Glyma.05G134600 hypothetical protein NA 1Chr05:32719903–32722773 (+)3.367e-11
Glyma.07G080400 hypothetical protein AT2G42010:PLDBETA1:phospholipase D beta 1 1Chr07:7312327–7319873 (-)6.86e-11
Glyma.07G081300 hypothetical protein NA 1Chr07:7442510–7449341 (-)6.86e-11
Glyma.12G090700 hypothetical protein NA 1Chr12:7423187–7426553 (-)4.745e-15
Glyma.12G091200 hypothetical protein NA 1Chr12:7464025–7465647 (+)4.745e-15
Glyma.12G092000 hypothetical protein AT1G08380:PSAO:photosystem I subunit O 1Chr12:7533212–7535764 (+)8.838e-27
Glyma.12G092300 hypothetical protein AT5G22300:NIT4:nitrilase 4 1Chr12:7550246–7557331 (-)4.745e-15
Glyma.13G352800 hypothetical protein NA 1Chr13:44161344–44167724 (-)9.971e-14
Glyma.13G354100 hypothetical protein AT3G16500:PAP1:phytochrome-associated protein 1 1Chr13:44243093–44247000 (-)9.971e-14
Glyma.14G020100 hypothetical protein NA 1Chr14:1431751–1433639 (+)3.098e-12
Glyma.14G073200 hypothetical protein NA 1Chr14:6151199–6153371 (-)4.649e-12
Glyma.14G073800 hypothetical protein NA 1Chr14:6182435–6194242 (-)4.649e-12
Glyma.14G205300 hypothetical protein NA 1Chr14:47046209–47056610 (-)1.153e-11
Glyma.14G219900 hypothetical protein AT4G24200:AT4G24200:Transcription elongation factor (TFIIS) family protein 1Chr14:48492539–48500189 (-)4.649e-12
Glyma.14G220200 hypothetical protein AT1G27940:ABCB13:P-glycoprotein 13__AT1G28010:ABCB14:P-glycoprotein 14 1Chr14:48521772–48527279 (+)4.649e-12
Glyma.18G212500 hypothetical protein NA 1Chr18:49917527–49919691 (+)7.737e-12
Glyma.18G213100 hypothetical protein NA 1Chr18:49992860–50002425 (+)7.737e-12
Glyma.18G214500 hypothetical protein NA 1Chr18:50125053–50127059 (-)7.737e-12
Glyma.18G214700 hypothetical protein NA 1Chr18:50134581–50139804 (-)7.737e-12
Glyma.20G070800 VAD1 AT1G02120:VAD1:GRAM domain family protein 1Chr20:25156336–25176331 (-)6.86e-11