Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P27060

Metabolite ID
P27060
Deionized mass
596.2220 Da
Average m/z
597.2303
Average RT
15.0919
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
51
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

51 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)4.384e-11
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 2Chr10:48805999–48811533 (-)9.636e-14
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)5.601e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)5.6e-12
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)3.261e-12
Glyma.20G108000 hypothetical protein NA 2Chr20:35047833–35051623 (-)1.104e-12
Glyma.20G120200 hypothetical protein NA 2Chr20:36268998–36282456 (-)1.512e-13
Glyma.02G265700 hypothetical protein NA 1Chr02:45059017–45060529 (-)4.18e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.332e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)9.88e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.404e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)3.083e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)3.083e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)3.083e-11
Glyma.05G147700 hypothetical protein NA 1Chr05:34199925–34202541 (+)7.227e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.565e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.192e-13
Glyma.06G085900 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr06:6617102–6622706 (-)4.067e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)7.593e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)4.372e-12
Glyma.11G048600 hypothetical protein AT5G67470:FH6:formin homolog 6 1Chr11:3634128–3639401 (-)9.314e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)4.168e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)8.541e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)8.539e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)8.539e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)8.541e-11
Glyma.11G179000 hypothetical protein AT2G27230:LHW:transcription factor-like protein 1Chr11:24412040–24417199 (+)2.277e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.749e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.749e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.404e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.404e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)5.601e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)5.565e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)6.192e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)5.859e-11
Glyma.16G180000 hypothetical protein NA 1Chr16:34064572–34069421 (+)2.349e-11
Glyma.16G180100 hypothetical protein NA 1Chr16:34070806–34076053 (+)2.349e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)2.816e-11
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)4.384e-11
Glyma.17G257100 hypothetical protein AT1G75660:XRN3:5'-3' exoribonuclease 3 1Chr17:41113121–41125026 (+)1.401e-11
Glyma.17G258400 hypothetical protein AT1G30755:AT1G30755:elongation factor G, putative (DUF668) 1Chr17:41248979–41254225 (+)3.905e-12
Glyma.17G258700 hypothetical protein AT4G24190:SHD:Chaperone protein htpG family protein 1Chr17:41280124–41284980 (-)1.083e-13
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)8.911e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)5.582e-12
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)6.802e-13
Glyma.20G107600 hypothetical protein NA 1Chr20:35025241–35029762 (+)9e-11
Glyma.20G107700 hypothetical protein AT2G16860:AT2G16860:GCIP-interacting family protein 1Chr20:35033414–35036538 (+)2.337e-11
Glyma.20G107900 hypothetical protein NA 1Chr20:35044042–35046452 (-)1.253e-12
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)3.292e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)4.252e-15
Glyma.20G110000 hypothetical protein AT3G54260:TBL36:TRICHOME BIREFRINGENCE-LIKE 36 1Chr20:35229423–35231861 (+)8.883e-13