Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P26910

Metabolite ID
P26910
Deionized mass
557.2629 Da
Average m/z
558.2685
Average RT
15.0804
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
82
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

82 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 4Chr16:30864919–30872425 (+)4.094e-15
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)2.84e-11
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)4.764e-12
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 2Chr07:9523110–9526319 (+)5.764e-12
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)9.558e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.475e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.475e-11
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 2Chr16:30514629–30519598 (+)9.39e-12
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)7.568e-12
Glyma.16G147400 hypothetical protein NA 2Chr16:30817535–30821568 (+)5.588e-13
Glyma.18G231300 hypothetical protein AT3G61310:AT3G61310:AT hook motif DNA-binding family protein 2Chr18:51979095–51987062 (-)4.172e-12
Glyma.01G021600 hypothetical protein AT5G65540:AT5G65540:transcription initiation factor TFIID subunit 1Chr01:2189923–2194362 (-)6.341e-11
Glyma.01G021700 hypothetical protein NA 1Chr01:2197811–2200232 (+)9.252e-11
Glyma.01G022000 hypothetical protein NA 1Chr01:2209688–2210849 (-)9.252e-11
Glyma.01G022200 hypothetical protein NA 1Chr01:2212834–2213622 (+)9.252e-11
Glyma.01G022300 hypothetical protein NA 1Chr01:2215383–2217438 (+)1.336e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.084e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.084e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)7.581e-13
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 1Chr03:1875182–1876855 (+)9.027e-11
Glyma.03G021600 hypothetical protein AT2G45510:CYP704A2:cytochrome P450, family 704, subfamily A, polypeptide 2__AT2G44890:CYP704A1:cytochrome P450, family … 1Chr03:2240686–2246512 (-)3.859e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)2.225e-13
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)5.355e-15
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)4.134e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)2.367e-11
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)4.22e-11
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)2.625e-11
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)6.001e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.322e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.296e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)2.84e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)2.84e-11
Glyma.07G087700 hypothetical protein AT3G24495:MSH7:MUTS homolog 7 1Chr07:8111751–8121053 (+)3.552e-12
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)1.002e-13
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)6.404e-14
Glyma.09G237900 hypothetical protein NA 1Chr09:45960580–45964267 (+)3.295e-12
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)1.989e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)4.328e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.687e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.687e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.687e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.687e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.242e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.051e-14
Glyma.10G172600 hypothetical protein AT5G41900:AT5G41900:alpha/beta-Hydrolases superfamily protein__AT1G64670:BDG1:alpha/beta-Hydrolases superfamily protein 1Chr10:40628401–40633140 (-)6.93e-12
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)4.249e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.792e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.792e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.975e-12
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.975e-12
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)2.641e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)9.18e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)9.18e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.475e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)2.053e-12
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)5.41e-13
Glyma.14G087900 hypothetical protein NA 1Chr14:7887761–7897469 (+)2.273e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)5.298e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)8.998e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)5.298e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)5.298e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)8.156e-15
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)8.957e-13
Glyma.16G028100 hypothetical protein AT3G07570:AT3G07570:Cytochrome b561/ferric reductase transmembrane with DOMON related domain-containing protein 1Chr16:2725294–2733429 (-)5.538e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)5.973e-12
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)2.34e-12
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)5.133e-14
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)2.063e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)5.133e-14
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)7.568e-12
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)1.458e-12
Glyma.16G147500 hypothetical protein NA 1Chr16:30832490–30834904 (+)1.543e-11
Glyma.16G196400 hypothetical protein AT5G07270:XBAT33:uncharacterized protein 1Chr16:35782198–35790495 (-)2.947e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)9.053e-12
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)6.147e-11
Glyma.18G006800 hypothetical protein AT1G67370:ASY1:DNA-binding HORMA family protein 1Chr18:495989–502111 (-)5.775e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)1.788e-12
Glyma.18G231500 hypothetical protein NA 1Chr18:52019138–52019828 (-)6.8e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)4.343e-11
Glyma.18G266200 hypothetical protein NA 1Chr18:55065716–55066843 (-)7.372e-12
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)3.606e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)5.954e-13