Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P26863

Metabolite ID
P26863
Deionized mass
97.0244 Da
Average m/z
98.0311
Average RT
15.0784
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
75
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

75 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 2Chr06:50401945–50408153 (+)9.762e-12
Glyma.13G201600 hypothetical protein NA 2Chr13:31521512–31522992 (+)2.131e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.396e-13
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)8.776e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.967e-13
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)2.2e-11
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)6.319e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)3.631e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.69e-12
Glyma.03G258000 hypothetical protein AT4G00980:AT4G00980:zinc knuckle (CCHC-type) family protein 1Chr03:45241396–45246507 (+)5.693e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.004e-14
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.671e-14
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.211e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)9.899e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.619e-13
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)1.023e-11
Glyma.06G301000 hypothetical protein NA 1Chr06:49001317–49005605 (+)4.968e-11
Glyma.06G301100 hypothetical protein AT2G16030:AT2G16030:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr06:49013527–49014231 (+)2.614e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.362e-12
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)8.009e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.924e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.659e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.659e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.659e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.659e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.209e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.834e-13
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.379e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)3.819e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)3.819e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)3.819e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)3.819e-11
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)1.796e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)4.8e-12
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)4.8e-12
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)4.8e-12
Glyma.11G192600 hypothetical protein AT2G28200:AT2G28200:C2H2-type zinc finger family protein 1Chr11:26572944–26574724 (-)3.965e-11
Glyma.11G239000 hypothetical protein AT5G10120:AT5G10120:Ethylene insensitive 3 family protein 1Chr11:33337797–33339122 (-)8.756e-11
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)2.76e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)8.249e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)8.249e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)4.363e-12
Glyma.13G201300 hypothetical protein NA 1Chr13:31497499–31499001 (+)4.055e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)2.222e-13
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.222e-13
Glyma.15G107800 hypothetical protein AT1G64570:DUO3:Homeodomain-like superfamily protein 1Chr15:8473049–8483746 (+)1.686e-11
Glyma.15G108100 hypothetical protein NA 1Chr15:8500878–8505582 (-)9.553e-11
Glyma.15G110200 hypothetical protein NA 1Chr15:8634006–8639001 (-)3.348e-11
Glyma.15G111000 hypothetical protein AT1G62305:AT1G62305:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein__AT1G11940:AT1G11940:Cor… 1Chr15:8692505–8697919 (-)8.114e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)9.66e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)9.66e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)9.66e-11
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)3.279e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)2.45e-13
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)2.456e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)5.38e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)4.118e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)4.132e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)4.132e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)5.333e-11
Glyma.17G004500 hypothetical protein AT5G47800:AT5G47800:Phototropic-responsive NPH3 family protein 1Chr17:444580–451107 (-)6.015e-11
Glyma.17G005900 hypothetical protein AT4G17215:AT4G17215:Pollen Ole e 1 allergen and extensin family protein__AT2G40113:AT2G40113:Pollen Ole e 1 allergen an… 1Chr17:546212–548525 (+)6.015e-11
Glyma.17G006300 hypothetical protein AT4G16380:AT4G16380:Heavy metal transport/detoxification superfamily protein 1Chr17:586135–588091 (+)4.367e-11
Glyma.17G007000 hypothetical protein NA 1Chr17:615525–616722 (+)4.367e-11
Glyma.17G007300 hypothetical protein AT4G16440:NAR1:ferredoxin hydrogenase 1Chr17:621626–627757 (-)4.367e-11
Glyma.17G007400 hypothetical protein NA 1Chr17:630066–634738 (-)3.776e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)2.628e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)2.628e-12
Glyma.17G214600 hypothetical protein NA 1Chr17:36049053–36054871 (-)5.361e-11
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)4.74e-12
Glyma.19G128100 hypothetical protein NA 1Chr19:38728037–38732422 (+)4.193e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)2.09e-15
Glyma.19G222200 hypothetical protein NA 1Chr19:47439424–47441508 (+)6.575e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)8.13e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)6.664e-11