Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P26776

Metabolite ID
P26776
Deionized mass
445.2070 Da
Average m/z
446.2108
Average RT
15.0695
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
42
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

42 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)8.672e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)5.415e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.081e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.081e-14
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)3.943e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)6.116e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.203e-13
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)1.355e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)6.869e-11
Glyma.05G130700 hypothetical protein AT2G34560:CCP1:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr05:32376592–32384905 (+)3.547e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)8.737e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)8.184e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.726e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.293e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)7.985e-16
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)1.421e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)8.672e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)8.672e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)8.672e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)8.672e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)3.711e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)3.531e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)8.771e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)8.771e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)8.771e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)8.771e-12
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)5.316e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.405e-13
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.538e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)4.11e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)4.723e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)4.723e-12
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)8.754e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)6.133e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)6.133e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)5.415e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)6.951e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)6.951e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.081e-14
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)1.36e-12
Glyma.16G140000 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 1Chr16:29738375–29739010 (+)4.03e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)7.032e-11