Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P26717

Metabolite ID
P26717
Deionized mass
1012.2832 Da
Average m/z
1013.2921
Average RT
15.0543
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
79
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

79 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)1.81e-12
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)4.133e-12
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)8.594e-11
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)1.05e-13
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)1.05e-13
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)1.05e-13
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)2.722e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)4.725e-12
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)1.867e-15
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 2Chr16:26057276–26069534 (+)2.236e-13
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)2.633e-15
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)1.771e-12
Glyma.01G234100 hypothetical protein AT5G13270:RARE1:Pentatricopeptide repeat (PPR) superfamily protein 1Chr01:56022128–56026001 (+)3.425e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)3.358e-12
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)4.002e-11
Glyma.02G256500 hypothetical protein AT5G10770:AT5G10770:Eukaryotic aspartyl protease family protein 1Chr02:44298831–44300884 (+)6.271e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)6.336e-11
Glyma.03G169700 hypothetical protein AT2G20240:TRM17:GPI-anchored adhesin-like protein, putative (DUF3741)__AT4G28760:TRM20:methyl-coenzyme M reductase II s… 1Chr03:38442950–38448706 (+)8.719e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)2.51e-11
Glyma.04G022700 hypothetical protein AT1G11320:AT1G11320:GDSL esterase/lipase 1Chr04:1785557–1788191 (-)3.138e-11
Glyma.04G023600 hypothetical protein AT4G24200:AT4G24200:Transcription elongation factor (TFIIS) family protein 1Chr04:1864445–1871054 (+)2.49e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)6.178e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.972e-13
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.974e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.77e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.77e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.77e-12
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)1.139e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)1.139e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)9.626e-11
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:20444715–20447665 (-)7.022e-14
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)7.995e-12
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)3.705e-11
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)1.05e-13
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)1.05e-13
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)1.05e-13
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)7.179e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)1.05e-13
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)1.05e-13
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)7.893e-13
Glyma.11G109100 hypothetical protein NA 1Chr11:8322727–8324868 (-)7.246e-11
Glyma.11G109900 hypothetical protein AT4G27630:GTG2:GPCR-type G protein 2 1Chr11:8378708–8386493 (-)8.141e-11
Glyma.11G110100 hypothetical protein AT2G16510:AT2G16510:ATPase, F0/V0 complex, subunit C protein 1Chr11:8397135–8398949 (-)1.16e-11
Glyma.11G110300 hypothetical protein AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-d… 1Chr11:8402144–8406496 (-)1.267e-13
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)8.141e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)8.141e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)8.747e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)3.671e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)3.671e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)3.914e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)3.914e-11
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)3.053e-12
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)3.053e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.194e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.357e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.194e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.194e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)5.447e-14
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)1.81e-12
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)1.81e-12
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)1.81e-12
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)1.81e-12
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)4.008e-12
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)4.133e-12
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)4.133e-12
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)1.118e-11
Glyma.16G147400 hypothetical protein NA 1Chr16:30817535–30821568 (+)3.391e-11
Glyma.16G160900 hypothetical protein NA 1Chr16:32013447–32016235 (+)9.893e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.859e-11
Glyma.16G180000 hypothetical protein NA 1Chr16:34064572–34069421 (+)7.372e-11
Glyma.16G180100 hypothetical protein NA 1Chr16:34070806–34076053 (+)7.372e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)2.65e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)8.876e-11
Glyma.17G251800 hypothetical protein NA 1Chr17:40633579–40636068 (+)7.099e-12
Glyma.17G251900 hypothetical protein AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein 1Chr17:40641019–40644794 (+)7.099e-12
Glyma.18G204200 hypothetical protein NA 1Chr18:48697660–48700908 (+)7.652e-11
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 1Chr19:472201–476152 (-)9.248e-11
Glyma.19G032800 hypothetical protein NA 1Chr19:4196959–4199265 (-)3.443e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)5.475e-11