Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P26597

Metabolite ID
P26597
Deionized mass
140.1187 Da
Average m/z
141.1258
Average RT
15.0154
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
47
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

47 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 2Chr03:1875182–1876855 (+)2.69e-12
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 2Chr03:5113019–5121557 (+)3.823e-12
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)9.711e-11
Glyma.06G112900 hypothetical protein AT1G77590:LACS9:long chain acyl-CoA synthetase 9 2Chr06:9174373–9179970 (+)1.112e-12
Glyma.01G046600 hypothetical protein AT1G14280:PKS2:phytochrome kinase substrate 2 1Chr01:5379316–5382027 (-)9.666e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.293e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)1.01e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)5.524e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)8.537e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.88e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)9.767e-12
Glyma.06G113100 hypothetical protein AT4G08330:AT4G08330:uncharacterized protein 1Chr06:9197790–9199755 (-)4.371e-11
Glyma.06G113300 hypothetical protein AT1G21810:AT1G21810:filament-like protein (DUF869) 1Chr06:9206753–9210941 (+)4.371e-11
Glyma.06G114100 hypothetical protein AT1G77470:RFC3:replication factor C subunit 3 1Chr06:9246695–9254490 (-)4.658e-12
Glyma.06G114700 hypothetical protein AT1G77510:PDIL1-2:PDI-like 1-2 1Chr06:9307220–9315112 (+)1.735e-17
Glyma.06G118500 hypothetical protein NA 1Chr06:9644661–9650144 (-)2.369e-13
Glyma.06G118800 hypothetical protein NA 1Chr06:9666921–9667708 (+)2.369e-13
Glyma.06G121000 hypothetical protein NA 1Chr06:9848464–9850191 (-)1.072e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)6.871e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)3.953e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)6.871e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)6.871e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)3.953e-12
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)7.544e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)8.113e-13
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)2.233e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)6.174e-14
Glyma.08G184300 hypothetical protein NA 1Chr08:14784345–14786953 (+)7.555e-12
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)2.068e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.812e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.812e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.812e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.812e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.204e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.332e-13
Glyma.11G119600 hypothetical protein AT2G16130:PMT2:polyol/monosaccharide transporter 2 1Chr11:9127497–9129972 (-)2.386e-11
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)2.135e-12
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)2.135e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)4.294e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.766e-17
Glyma.15G152900 hypothetical protein AT4G15755:AT4G15755:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr15:12680146–12681864 (-)5.282e-13
Glyma.15G153400 hypothetical protein NA 1Chr15:12730592–12733439 (+)8.581e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)5.03e-12
Glyma.16G050900 COL16 NA 1Chr16:4874634–4878624 (+)6.335e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)7.738e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)8.476e-12
Glyma.20G106400 hypothetical protein AT5G23590:AT5G23590:DNAJ heat shock N-terminal domain-containing protein 1Chr20:34888699–34893605 (-)6.962e-11