Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P26565

Metabolite ID
P26565
Deionized mass
782.3114 Da
Average m/z
783.3181
Average RT
15.0083
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
67
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

67 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G161500 hypothetical protein NA 3Chr16:32076715–32092322 (-)6.699e-11
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 2Chr03:1875182–1876855 (+)4.074e-13
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 2Chr03:2007617–2009871 (+)9.869e-16
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)6.242e-11
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)4.471e-17
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)2.061e-14
Glyma.16G159100 hypothetical protein NA 2Chr16:31889835–31894662 (+)3.993e-13
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)5.676e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)7.267e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)8.947e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.602e-13
Glyma.03G037300 hypothetical protein NA 1Chr03:4566741–4573890 (+)7.102e-11
Glyma.03G040600 hypothetical protein AT2G38400:AGT3:alanine:glyoxylate aminotransferase 3 1Chr03:5113019–5121557 (+)7.482e-11
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)9.734e-14
Glyma.04G190700 hypothetical protein NA 1Chr04:46143583–46146881 (+)7.626e-11
Glyma.04G190800 hypothetical protein AT5G07460:PMSR2:peptidemethionine sulfoxide reductase 2 1Chr04:46143080–46147709 (-)7.626e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)6.837e-14
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)1.18e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)1.18e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)1.18e-13
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)8.317e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.334e-11
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)1.018e-12
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 1Chr05:40992124–41003814 (+)2.314e-12
Glyma.05G232600 hypothetical protein AT4G13360:AT4G13360:ATP-dependent caseinolytic (Clp) protease/crotonase family protein__AT3G24360:AT3G24360:ATP-depende… 1Chr05:41009642–41015826 (+)1.662e-12
Glyma.05G232800 hypothetical protein AT3G18500:AT3G18500:DNAse I-like superfamily protein 1Chr05:41022747–41030067 (-)1.662e-12
Glyma.05G233100 hypothetical protein NA 1Chr05:41041130–41048359 (-)1.662e-12
Glyma.05G233400 ALMT9 aluminum-activated malate transporter 9 AT3G18440:ALMT9:aluminum-activated malate transporter 9 1Chr05:41058365–41063472 (-)1.662e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.608e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.981e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.038e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.038e-13
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)5.624e-11
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)8.775e-14
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)2.854e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)2.854e-12
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)2.854e-12
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)1.588e-11
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)1.588e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.905e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)6.242e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)6.242e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)6.242e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)6.242e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)6.547e-11
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)6.49e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)4.111e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)2.139e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)4.471e-17
Glyma.14G149000 hypothetical protein NA 1Chr14:32164321–32167686 (+)6.934e-11
Glyma.14G150300 hypothetical protein AT4G08330:AT4G08330:uncharacterized protein 1Chr14:32471354–32474446 (-)6.279e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.061e-14
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)7.897e-11
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)4.984e-12
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)4.984e-12
Glyma.16G159300 hypothetical protein NA 1Chr16:31903993–31908962 (+)7.478e-11
Glyma.16G160700 hypothetical protein NA 1Chr16:31986544–31990022 (+)2.391e-11
Glyma.16G160900 hypothetical protein NA 1Chr16:32013447–32016235 (+)5.327e-12
Glyma.16G161000 hypothetical protein NA 1Chr16:32027849–32031609 (-)1.398e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)3.161e-14
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)2.512e-12
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)5.35e-12
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)5.928e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.923e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.923e-12
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr19:41018746–41025024 (+)3.45e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)2.671e-11