Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P26375

Metabolite ID
P26375
Deionized mass
392.1107 Da
Average m/z
393.1180
Average RT
14.9562
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
59
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

59 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 5Chr16:36856833–36863994 (-)3.802e-13
Glyma.07G095000 hypothetical protein NA 4Chr07:8843665–8855430 (+)1.948e-11
Glyma.14G170900 hypothetical protein AT1G78060:AT1G78060:Glycosyl hydrolase family protein 4Chr14:42298358–42306613 (-)7.942e-11
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)3.901e-11
Glyma.20G106300 hypothetical protein AT2G16950:TRN1:transportin 1 3Chr20:34868954–34885305 (-)9.435e-11
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)1.949e-11
Glyma.06G313500 hypothetical protein NA 2Chr06:50191600–50203098 (-)2.574e-12
Glyma.07G095400 hypothetical protein NA 2Chr07:8914725–8920132 (+)3.931e-11
Glyma.07G095800 hypothetical protein NA 2Chr07:8969502–8976133 (+)3.931e-11
Glyma.20G120200 hypothetical protein NA 2Chr20:36268998–36282456 (-)5.62e-14
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)9.102e-12
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)3.785e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.427e-12
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)2.052e-12
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 1Chr05:40259388–40262641 (+)5.036e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.119e-11
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)2.969e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.348e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.395e-11
Glyma.06G085900 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr06:6617102–6622706 (-)3.897e-11
Glyma.06G201700 hypothetical protein NA 1Chr06:18577883–18617874 (+)6.35e-11
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)8.48e-12
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)8.48e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)3.901e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)3.901e-11
Glyma.07G093700 hypothetical protein AT3G18290:BTS:zinc finger protein-like protein 1Chr07:8723740–8734056 (-)2.548e-11
Glyma.07G093800 hypothetical protein NA 1Chr07:8755633–8760962 (+)1.753e-13
Glyma.07G094200 hypothetical protein NA 1Chr07:8792240–8797837 (+)8.167e-12
Glyma.07G095500 hypothetical protein NA 1Chr07:8934807–8940626 (+)3.931e-11
Glyma.07G129600 hypothetical protein AT4G29670:ACHT2:atypical CYS HIS rich thioredoxin 2 1Chr07:15404178–15410144 (-)1.778e-11
Glyma.10G263800 hypothetical protein AT1G23010:LPR1:Cupredoxin superfamily protein 1Chr10:48805999–48811533 (-)6.315e-11
Glyma.11G179000 hypothetical protein AT2G27230:LHW:transcription factor-like protein 1Chr11:24412040–24417199 (+)1.669e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.517e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)2.517e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)2.517e-11
Glyma.13G163400 hypothetical protein AT5G20350:TIP1:Ankyrin repeat family protein with DHHC zinc finger domain-containing protein 1Chr13:27861309–27869162 (+)3.311e-12
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)2.739e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)5.171e-11
Glyma.14G171100 hypothetical protein NA 1Chr14:42357087–42363791 (-)8.868e-11
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)8.003e-11
Glyma.16G057500 hypothetical protein NA 1Chr16:5631176–5634867 (-)1.133e-11
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:5656328–5663040 (-)4.599e-13
Glyma.16G066900 hypothetical protein NA 1Chr16:6636803–6639454 (+)9.692e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)3.898e-11
Glyma.16G180000 hypothetical protein NA 1Chr16:34064572–34069421 (+)1.776e-12
Glyma.16G180100 hypothetical protein NA 1Chr16:34070806–34076053 (+)1.776e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)2.537e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)2.001e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)1.869e-11
Glyma.17G257100 hypothetical protein AT1G75660:XRN3:5'-3' exoribonuclease 3 1Chr17:41113121–41125026 (+)1.837e-11
Glyma.17G258700 hypothetical protein AT4G24190:SHD:Chaperone protein htpG family protein 1Chr17:41280124–41284980 (-)7.84e-11
Glyma.20G105500 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein__AT5G05320:AT5G05320:FAD/NAD(P)-binding oxidoreduc… 1Chr20:34813357–34815998 (-)2.84e-11
Glyma.20G106800 hypothetical protein AT4G38520:AT4G38520:Protein phosphatase 2C family protein__AT3G51370:AT3G51370:Protein phosphatase 2C family protein 1Chr20:34935548–34940516 (-)9.618e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)1.858e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)3.192e-12
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)4.464e-14
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)1.714e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)1.404e-13
Glyma.20G114000 hypothetical protein NA 1Chr20:35578719–35584659 (-)4.923e-11