Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P26197

Metabolite ID
P26197
Deionized mass
582.2804 Da
Average m/z
583.2889
Average RT
14.9050
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
80
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

80 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.20G071200 hypothetical protein NA 4Chr20:25316540–25366827 (+)4.416e-11
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)3.453e-11
Glyma.02G006500 hypothetical protein AT4G01660:ABC1:ABC transporter 1 2Chr02:693193–700260 (+)1.624e-11
Glyma.13G053000 hypothetical protein AT3G02230:RGP1:reversibly glycosylated polypeptide 1 2Chr13:15046821–15050021 (+)4.973e-14
Glyma.20G070800 VAD1 AT1G02120:VAD1:GRAM domain family protein 2Chr20:25156336–25176331 (-)4.416e-11
Glyma.20G084900 hypothetical protein NA 2Chr20:31707347–31709780 (-)4.416e-11
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)5.831e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)8.69e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)8.69e-11
Glyma.02G126300 hypothetical protein NA 1Chr02:12670653–12677305 (+)2.618e-11
Glyma.02G126400 hypothetical protein NA 1Chr02:12678071–12683492 (+)2.618e-11
Glyma.02G126800 hypothetical protein AT1G13580:LAG13:LAG1 longevity assurance-like protein__AT3G25540:LAG1:TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain co… 1Chr02:12771578–12777488 (+)2.618e-11
Glyma.02G127400 hypothetical protein AT1G26190:AT1G26190:Phosphoribulokinase / Uridine kinase family 1Chr02:12849745–12869066 (+)2.618e-11
Glyma.02G127600 hypothetical protein NA 1Chr02:12976382–12983547 (+)2.618e-11
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)2.679e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.681e-12
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)2.103e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.019e-12
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)4.533e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)2.801e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)6.814e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)3.724e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)6.182e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)6.182e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.081e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)3.948e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)3.948e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)3.948e-12
Glyma.05G220900 hypothetical protein NA 1Chr05:40040654–40043504 (+)2.251e-13
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)4.785e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.584e-15
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.276e-14
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)9.022e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.299e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.944e-17
Glyma.05G239000 hypothetical protein NA 1Chr05:41489721–41491777 (+)2.304e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.934e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.934e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)9.851e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.953e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.092e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.092e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.342e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.342e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)8.161e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)8.161e-11
Glyma.13G053800 hypothetical protein NA 1Chr13:15110071–15112808 (+)9.21e-12
Glyma.13G062700 hypothetical protein AT3G01180:SS2:starch synthase 2 1Chr13:16045152–16059846 (-)2.643e-11
Glyma.13G062800 hypothetical protein AT5G48600:SMC3:structural maintenance of chromosome 3 1Chr13:16067222–16078901 (-)2.643e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 1Chr13:24677399–24693129 (-)5.386e-11
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)5.386e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.134e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.134e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)2.134e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)2.134e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.088e-11
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)8.977e-11
Glyma.16G120200 hypothetical protein AT4G35730:AT4G35730:Regulator of Vps4 activity in the MVB pathway protein 1Chr16:26823772–26828068 (+)9.513e-12
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)3.842e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)8.877e-13
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)4.502e-11
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)6.076e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)7.711e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.935e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.935e-12
Glyma.19G129500 hypothetical protein AT2G41160:AT2G41160:Ubiquitin-associated (UBA) protein 1Chr19:38884116–38901744 (-)1.92e-11
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)1.868e-11
Glyma.20G070100 hypothetical protein NA 1Chr20:24897324–24898925 (-)4.416e-11
Glyma.20G071000 hypothetical protein NA 1Chr20:25298698–25300941 (+)4.416e-11
Glyma.20G074500 hypothetical protein AT2G38710:AT2G38710:AMMECR1 family 1Chr20:26796617–26809116 (-)4.416e-11
Glyma.20G074600 hypothetical protein NA 1Chr20:26803189–26805842 (+)4.416e-11
Glyma.20G076500 hypothetical protein AT1G04780:AT1G04780:Ankyrin repeat family protein 1Chr20:27700886–27708055 (+)4.416e-11
Glyma.20G083800 hypothetical protein NA 1Chr20:31482676–31483763 (-)4.416e-11
Glyma.20G083900 hypothetical protein NA 1Chr20:31503404–31505246 (-)4.416e-11
Glyma.20G084000 hypothetical protein AT4G30220:RUXF:small nuclear ribonucleoprotein F__AT2G14285:AT2G14285:Small nuclear ribonucleoprotein family protein 1Chr20:31536334–31538924 (+)4.416e-11
Glyma.20G084500 hypothetical protein AT2G33340:MAC3B:MOS4-associated complex 3B__AT1G04510:MAC3A:MOS4-associated complex 3A 1Chr20:31666190–31674959 (-)4.416e-11
Glyma.20G084700 hypothetical protein NA 1Chr20:31686813–31687483 (-)4.416e-11
Glyma.20G085000 hypothetical protein NA 1Chr20:31745486–31748473 (-)4.416e-11
Glyma.20G085300 hypothetical protein AT2G33360:AT2G33360:cadherin EGF LAG seven-pass G-type receptor, putative (DUF3527) 1Chr20:31823173–31827117 (+)4.416e-11
Glyma.20G085400 hypothetical protein NA 1Chr20:31828204–31832688 (+)4.416e-11