Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P26180

Metabolite ID
P26180
Deionized mass
414.0772 Da
Average m/z
415.0859
Average RT
14.8994
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
41
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

41 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.05G164700 hypothetical protein NA 2Chr05:35543931–35549196 (-)2.234e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 2Chr13:24677399–24693129 (-)1.4e-11
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.629e-16
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.629e-16
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)4.003e-12
Glyma.03G001600 hypothetical protein AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:177390–180789 (-)4.671e-11
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 1Chr03:1875182–1876855 (+)5.74e-11
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)1.009e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)9.57e-11
Glyma.04G082800 hypothetical protein NA 1Chr04:6977997–6983005 (-)3.154e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.964e-15
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 1Chr05:31926976–31929133 (+)3.773e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.972e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)6.909e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)6.909e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)6.909e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.741e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.306e-13
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)6.162e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)6.162e-12
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)6.099e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.424e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.424e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)1.409e-12
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)3.078e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)5.285e-11
Glyma.13G081100 hypothetical protein NA 1Chr13:18881427–18886462 (-)3.767e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.4e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.987e-14
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.987e-14
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.629e-16
Glyma.13G136500 hypothetical protein NA 1Chr13:24910198–24916336 (-)1.712e-12
Glyma.14G198100 hypothetical protein NA 1Chr14:46337677–46340654 (+)2.626e-11
Glyma.15G012000 hypothetical protein NA 1Chr15:936268–944374 (+)3.59e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)2.528e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)3.383e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)2.528e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)2.528e-11
Glyma.16G140000 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 1Chr16:29738375–29739010 (+)1.87e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)7.468e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.632e-14