Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P26171

Metabolite ID
P26171
Deionized mass
536.2023 Da
Average m/z
537.2107
Average RT
14.8974
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
68
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

68 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)3.592e-11
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 3Chr18:47102746–47129707 (+)1.683e-11
Glyma.05G164700 hypothetical protein NA 2Chr05:35543931–35549196 (-)2.974e-15
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.668e-11
Glyma.15G263500 hypothetical protein AT1G79440:ALDH5F1:aldehyde dehydrogenase 5F1 2Chr15:49664672–49682418 (+)5.838e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)1.132e-12
Glyma.18G273000 hypothetical protein NA 2Chr18:55575628–55582063 (-)6.911e-13
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 2Chr18:57674222–57678396 (+)1.271e-11
Glyma.01G099100 hypothetical protein NA 1Chr01:33017228–33023840 (+)3.441e-11
Glyma.01G099600 hypothetical protein AT3G53930:AT3G53930:Protein kinase superfamily protein__AT2G37840:AT2G37840:Protein kinase superfamily protein 1Chr01:33115843–33125726 (-)3.441e-11
Glyma.01G099900 hypothetical protein NA 1Chr01:33275414–33282430 (+)3.441e-11
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)5.367e-12
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)3.851e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.62e-11
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)2.28e-12
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)9.144e-12
Glyma.04G082800 hypothetical protein NA 1Chr04:6977997–6983005 (-)9.487e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)2.385e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)5.819e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)8.965e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)8.965e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.602e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)9.289e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)9.289e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)9.289e-13
Glyma.05G161500 GSTU17 NA 1Chr05:35306224–35308154 (+)5.443e-12
Glyma.05G165200 hypothetical protein NA 1Chr05:35586701–35592272 (+)6.82e-14
Glyma.05G165300 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr05:35593651–35600917 (+)6.82e-14
Glyma.05G165700 hypothetical protein NA 1Chr05:35623150–35631179 (-)3.126e-11
Glyma.05G166000 hypothetical protein NA 1Chr05:35657133–35657621 (-)6.82e-14
Glyma.05G166400 hypothetical protein NA 1Chr05:35692494–35699192 (+)2.337e-11
Glyma.05G166800 SHOOT1 SHOOT1 protein AT1G55480:ZKT:protein containing PDZ domain, a K-box domain, and a TPR region 1Chr05:35731069–35735416 (+)4.411e-11
Glyma.05G191600 hypothetical protein AT2G13680:CALS5:callose synthase 5 1Chr05:37711639–37726572 (-)1.285e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)7.325e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)7.326e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)7.326e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.398e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.398e-12
Glyma.07G018100 hypothetical protein NA 1Chr07:1442368–1445430 (-)4.514e-11
Glyma.07G018300 hypothetical protein AT3G27750:EMB3123:PPR containing protein 1Chr07:1457706–1458428 (+)4.514e-11
Glyma.08G182400 hypothetical protein NA 1Chr08:14625596–14626713 (+)6.532e-11
Glyma.08G183700 Fasciclin-like arabinogalactan protein 19 NA 1Chr08:14738283–14742033 (+)9.039e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.218e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.218e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.454e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)4.454e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)4.454e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.668e-11
Glyma.14G213400 hypothetical protein NA 1Chr14:47844823–47847028 (+)2.359e-12
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)1.948e-11
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)1.948e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)2.114e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.982e-12
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)3.592e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)3.592e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)3.592e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)3.592e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)7.372e-13
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)3.547e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)7.656e-13
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)7.034e-12
Glyma.18G194900 hypothetical protein NA 1Chr18:46855096–46855729 (+)1.881e-11
Glyma.18G202600 FAD7-1 omega-3 fatty acid desaturase NA 1Chr18:48365045–48368299 (-)3.484e-11
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)3.043e-11
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)6.032e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.124e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.124e-12
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr19:41018746–41025024 (+)4.209e-11