Overview Annotation GWAS Evidence Associated genes

P26109

Metabolite ID
P26109
Deionized mass
552.2726 Da
Average m/z
553.2780
Average RT
14.8752
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
35
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

35 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G045600 hypothetical protein NA 3Chr01:5242432–5245038 (-)4.024e-15
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)2.957e-12
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)4.024e-15
Glyma.01G046600 hypothetical protein AT1G14280:PKS2:phytochrome kinase substrate 2 1Chr01:5379316–5382027 (-)1.173e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.648e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.648e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)8.942e-11
Glyma.05G220900 hypothetical protein NA 1Chr05:40040654–40043504 (+)1.536e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.369e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)4.361e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)6.395e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.453e-17
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.443e-14
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)6.52e-11
Glyma.08G184000 hypothetical protein AT2G01080:AT2G01080:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr08:14749219–14752814 (-)5.768e-11
Glyma.08G184300 hypothetical protein NA 1Chr08:14784345–14786953 (+)7.474e-12
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)1.906e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.871e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)1.686e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)4.024e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)1.373e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.5e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.5e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)1.5e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)1.5e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.424e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.131e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.424e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.424e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)4.379e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)6.987e-11
Glyma.18G238000 hypothetical protein AT1G01490:AT1G01490:Heavy metal transport/detoxification superfamily protein 1Chr18:52679724–52682816 (+)5.402e-12
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)3.719e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)4.002e-11
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)1.086e-11