Overview Annotation GWAS Evidence Associated genes

P25984

Metabolite ID
P25984
Deionized mass
611.2741 Da
Average m/z
612.2833
Average RT
14.8283
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
31
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

31 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G096800 hypothetical protein AT4G24460:CLT2:CRT (chloroquine-resistance transporter)-like transporter 2 4Chr04:8747857–8778229 (-)6.968e-11
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)1.199e-11
Glyma.04G098100 hypothetical protein AT2G34990:AT2G34990:RING/U-box superfamily protein__AT1G72200:AT1G72200:RING/U-box superfamily protein 2Chr04:8887523–8888545 (-)1.053e-11
Glyma.06G183500 hypothetical protein AT5G50000:AT5G50000:Protein kinase superfamily protein 2Chr06:15828917–15834067 (+)1.578e-12
Glyma.02G126400 hypothetical protein NA 1Chr02:12678071–12683492 (+)5.632e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.518e-11
Glyma.04G096300 hypothetical protein NA 1Chr04:8635554–8654734 (+)8.334e-11
Glyma.04G096500 hypothetical protein NA 1Chr04:8664088–8675605 (+)6.968e-11
Glyma.04G096600 hypothetical protein AT1G58250:SAB:HYPERSENSITIVE TO PI STARVATION 4 1Chr04:8693806–8724007 (-)6.968e-11
Glyma.04G096900 hypothetical protein NA 1Chr04:8778953–8796458 (-)6.968e-11
Glyma.04G097900 hypothetical protein AT5G65380:AT5G65380:MATE efflux family protein 1Chr04:8857667–8865249 (+)9.352e-12
Glyma.04G098300 hypothetical protein NA 1Chr04:8910522–8912389 (-)1.053e-11
Glyma.04G098400 hypothetical protein AT1G22490:AT1G22490:basic helix-loop-helix (bHLH) DNA-binding superfamily protein__AT1G72210:AT1G72210:basic helix-loop… 1Chr04:8914410–8916406 (+)2.898e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)5.512e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)3.963e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.523e-14
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)2.833e-14
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)6.08e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.577e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.295e-13
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)2.26e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)2.26e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)9.761e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)9.762e-13
Glyma.13G197700 hypothetical protein AT5G38730:AT5G38730:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr13:31174654–31180595 (-)2.035e-11
Glyma.13G200600 hypothetical protein AT1G64830:AT1G64830:Eukaryotic aspartyl protease family protein 1Chr13:31428112–31429431 (-)1.719e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)8.68e-14
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)8.68e-14
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)8.681e-14
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)8.312e-12
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)5.85e-13