P25964
Metabolite ID
P25964
Deionized mass
1120.5628 Da
Average m/z
1121.5698
Average RT
14.8229
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
54
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
54 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.06G305700 | hypothetical protein | AT2G05710:ACO3:aconitase 3 | 3 | Chr06:49451501–49461369 (-) | 8.56e-11 | |
| Glyma.09G053800 | hypothetical protein | NA | 3 | Chr09:4737413–4755632 (-) | 7.625e-12 | |
| Glyma.17G218600 | hypothetical protein | NA | 3 | Chr17:36975400–36982812 (-) | 8.351e-11 | |
| Glyma.03G120100 | hypothetical protein | AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 | 2 | Chr03:33174618–33180955 (+) | 2.325e-12 | |
| Glyma.14G093100 | hypothetical protein | NA | 2 | Chr14:8654730–8655892 (-) | 2.033e-14 | |
| Glyma.14G149300 | hypothetical protein | NA | 2 | Chr14:32235308–32258014 (+) | 7.067e-12 | |
| Glyma.16G031600 | hypothetical protein | NA | 2 | Chr16:2964569–2985013 (+) | 1.645e-12 | |
| Glyma.16G209300 | hypothetical protein | NA | 2 | Chr16:36856833–36863994 (-) | 8.42e-13 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 1 | Chr03:2423540–2428634 (-) | 1.063e-13 | |
| Glyma.03G119400 | hypothetical protein | AT5G43280:DCI1:delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 | 1 | Chr03:33050663–33053094 (+) | 1.113e-11 | |
| Glyma.05G224500 | hypothetical protein | NA | 1 | Chr05:40342583–40345336 (+) | 4.109e-11 | |
| Glyma.05G224700 | hypothetical protein | NA | 1 | Chr05:40351005–40361888 (+) | 3.1e-15 | |
| Glyma.05G226000 | hypothetical protein | AT5G19730:AT5G19730:Pectin lyase-like superfamily protein | 1 | Chr05:40458098–40461736 (+) | 4.611e-14 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 8.549e-11 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 1.066e-12 | |
| Glyma.06G201700 | hypothetical protein | NA | 1 | Chr06:18577883–18617874 (+) | 1.722e-11 | |
| Glyma.06G261900 | hypothetical protein | NA | 1 | Chr06:44875369–44879702 (-) | 1.38e-11 | |
| Glyma.06G305300 | hypothetical protein | NA | 1 | Chr06:49431590–49435985 (-) | 8.56e-11 | |
| Glyma.06G305600 | hypothetical protein | NA | 1 | Chr06:49446542–49450635 (-) | 8.56e-11 | |
| Glyma.08G139300 | hypothetical protein | AT2G22125:CSI1:binding protein | 1 | Chr08:10653279–10664544 (-) | 7.264e-11 | |
| Glyma.08G239500 | hypothetical protein | AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr08:20444715–20447665 (-) | 5.285e-13 | |
| Glyma.09G057300 | hypothetical protein | AT5G57330:AT5G57330:Galactose mutarotase-like superfamily protein | 1 | Chr09:5164998–5171598 (-) | 3.957e-12 | |
| Glyma.09G057400 | hypothetical protein | AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein | 1 | Chr09:5173554–5193820 (-) | 6.667e-13 | |
| Glyma.09G058900 | hypothetical protein | NA | 1 | Chr09:5397968–5404650 (-) | 1.273e-11 | |
| Glyma.09G270200 | hypothetical protein | AT5G01020:AT5G01020:Protein kinase superfamily protein | 1 | Chr09:48725417–48728520 (-) | 8.957e-11 | |
| Glyma.10G214700 | hypothetical protein | AT1G72000:A/N-InvF:Plant neutral invertase family protein__AT1G22650:A/N-InvD:Plant neutral invertase family protein__A… | 1 | Chr10:44674211–44679550 (-) | 8.976e-11 | |
| Glyma.11G110300 | hypothetical protein | AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-d… | 1 | Chr11:8402144–8406496 (-) | 6.682e-11 | |
| Glyma.11G221000 | RCA11 | AT2G39730:RCA:rubisco activase | 1 | Chr11:31621224–31624882 (-) | 9.305e-11 | |
| Glyma.12G028800 | hypothetical protein | AT1G50300:TAF15:TBP-associated factor 15 | 1 | Chr12:2148313–2153234 (-) | 2.976e-12 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 1 | Chr12:36267599–36271584 (+) | 7.553e-12 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 7.553e-12 | |
| Glyma.12G202400 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:36289704–36295084 (-) | 5.024e-11 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 4.158e-11 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 2.146e-12 | |
| Glyma.14G094900 | hypothetical protein | AT1G60960:IRT3:iron regulated transporter 3 | 1 | Chr14:8824846–8827258 (-) | 9.364e-11 | |
| Glyma.14G119800 | hypothetical protein | AT1G43850:SEU:SEUSS transcriptional co-regulator | 1 | Chr14:16751592–16763348 (-) | 7.883e-11 | |
| Glyma.14G148800 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr14:32154755–32157298 (+) | 7.067e-12 | |
| Glyma.15G233600 | hypothetical protein | NA | 1 | Chr15:43971478–43972713 (+) | 2.186e-11 | |
| Glyma.16G057600 | hypothetical protein | AT3G27170:CLC-B:chloride channel B | 1 | Chr16:5650591–5655830 (+) | 8.151e-12 | |
| Glyma.16G137600 | hypothetical protein | NA | 1 | Chr16:29468438–29472890 (-) | 3.204e-11 | |
| Glyma.16G139500 | hypothetical protein | AT5G66550:AT5G66550:Maf-like protein | 1 | Chr16:29686243–29690410 (-) | 1.506e-15 | |
| Glyma.16G142300 | hypothetical protein | AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein | 1 | Chr16:30086178–30091466 (-) | 2.707e-12 | |
| Glyma.16G160900 | hypothetical protein | NA | 1 | Chr16:32013447–32016235 (+) | 5.741e-11 | |
| Glyma.16G161500 | hypothetical protein | NA | 1 | Chr16:32076715–32092322 (-) | 6.994e-11 | |
| Glyma.16G180000 | hypothetical protein | NA | 1 | Chr16:34064572–34069421 (+) | 2.629e-11 | |
| Glyma.16G180100 | hypothetical protein | NA | 1 | Chr16:34070806–34076053 (+) | 2.629e-11 | |
| Glyma.16G208500 | EIF6 | AT3G55620:eIF6A:Translation initiation factor IF6 | 1 | Chr16:36806718–36809299 (+) | 6.062e-13 | |
| Glyma.17G218700 | hypothetical protein | NA | 1 | Chr17:36986191–36991558 (-) | 8.351e-11 | |
| Glyma.18G242900 | hypothetical protein | NA | 1 | Chr18:53113341–53119592 (-) | 8.554e-11 | |
| Glyma.18G251900 | hypothetical protein | AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… | 1 | Chr18:53855786–53862322 (-) | 2.578e-12 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 1.642e-11 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 1.642e-11 | |
| Glyma.20G112600 | hypothetical protein | AT5G04310:AT5G04310:Pectin lyase-like superfamily protein | 1 | Chr20:35468911–35474203 (+) | 2.196e-11 | |
| Glyma.20G120200 | hypothetical protein | NA | 1 | Chr20:36268998–36282456 (-) | 4.829e-11 |