Overview Annotation GWAS Evidence Associated genes

P25930

Metabolite ID
P25930
Deionized mass
692.2686 Da
Average m/z
693.2712
Average RT
14.8136
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
7
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

7 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G083200 hypothetical protein NA 1Chr14:7249145–7256947 (-)3.022e-15
Glyma.18G076500 hypothetical protein AT4G25434:NUDT10:nudix hydrolase homolog 10 1Chr18:7270366–7275460 (+)2.151e-13
Glyma.18G076700 hypothetical protein NA 1Chr18:7294408–7295154 (-)2.151e-13
Glyma.18G077600 hypothetical protein AT5G55660:AT5G55660:DEK domain-containing chromatin associated protein 1Chr18:7370852–7379408 (-)8.468e-11
Glyma.18G077700 hypothetical protein AT4G26630:AT4G26630:DEK domain-containing chromatin associated protein 1Chr18:7388452–7397522 (-)8.468e-11
Glyma.18G078300 hypothetical protein AT4G18220:AT4G18220:Drug/metabolite transporter superfamily protein 1Chr18:7504168–7506962 (+)3.416e-11
Glyma.19G262100 hypothetical protein NA 1Chr19:50522833–50524374 (-)2.861e-11