Overview Annotation GWAS Evidence Associated genes

P25884

Metabolite ID
P25884
Deionized mass
512.1580 Da
Average m/z
513.1626
Average RT
14.8006
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
3
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

3 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.18G220200 hypothetical protein AT2G38650:GAUT7:galacturonosyltransferase 7 2Chr18:50714270–50723555 (-)1.054e-11
Glyma.18G205200 hypothetical protein AT3G08880:AT3G08880:plectin-like protein__AT5G01570:AT5G01570:plectin-like protein 1Chr18:48902566–48905641 (+)6.861e-13
Glyma.18G220700 hypothetical protein AT4G00090:AT4G00090:Transducin/WD40 repeat-like superfamily protein 1Chr18:50749137–50759459 (+)5.747e-17