Overview Annotation GWAS Evidence Associated genes

P25809

Metabolite ID
P25809
Deionized mass
332.1165 Da
Average m/z
333.1244
Average RT
14.7766
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
10
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

10 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G172500 hypothetical protein AT3G59140:ABCC10:multidrug resistance-associated protein 14 2Chr16:33322352–33330062 (+)2.107e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)2.653e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)9.764e-11
Glyma.08G123500 hypothetical protein NA 1Chr08:9494946–9505931 (-)1.434e-13
Glyma.08G180900 hypothetical protein AT5G64570:XYL4:beta-D-xylosidase 4__AT5G09730:BXL3:beta-xylosidase 3 1Chr08:14516542–14521137 (+)4.864e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)3.128e-13
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)1.885e-15
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)2.013e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)3.327e-11
Glyma.10G037300 hypothetical protein AT3G54670:TTN8:Structural maintenance of chromosomes (SMC) family protein 1Chr10:3270545–3283318 (-)1.254e-11