Overview Annotation GWAS Evidence Associated genes

P25792

Metabolite ID
P25792
Deionized mass
332.1116 Da
Average m/z
333.1187
Average RT
14.7712
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
10
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

10 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G235400 hypothetical protein AT3G49260:iqd21:IQ-domain 21 1Chr04:50351726–50356449 (-)2.628e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)8.867e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)3.548e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)3.548e-11
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)4.485e-11
Glyma.19G009600 hypothetical protein NA 1Chr19:902949–903967 (-)1.246e-11
Glyma.19G009900 hypothetical protein NA 1Chr19:923053–937826 (-)2.686e-12
Glyma.20G105400 hypothetical protein AT2G17010:AT2G17010:Mechanosensitive ion channel family protein 1Chr20:34796301–34808587 (+)8.091e-11
Glyma.20G105600 hypothetical protein AT2G17033:AT2G17033:pentatricopeptide (PPR) repeat-containing protein 1Chr20:34818550–34820435 (-)8.09e-11
Glyma.20G106300 hypothetical protein AT2G16950:TRN1:transportin 1 1Chr20:34868954–34885305 (-)5.427e-11