Overview Annotation GWAS Evidence Associated genes

P25775

Metabolite ID
P25775
Deionized mass
568.2646 Da
Average m/z
569.2759
Average RT
14.7680
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
37
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

37 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G036200 hypothetical protein AT1G10510:emb2004:RNI-like superfamily protein 3Chr01:3791180–3811591 (-)7.225e-23
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)2.047e-17
Glyma.01G036500 hypothetical protein AT1G59980:ARL2:ARG1-like 2__AT1G24120:ARL1:ARG1-like 1 2Chr01:3821377–3825854 (-)7.225e-23
Glyma.16G161500 hypothetical protein NA 2Chr16:32076715–32092322 (-)1.158e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 2Chr16:35831912–35835153 (+)8.006e-12
Glyma.01G008200 hypothetical protein NA 1Chr01:802095–812507 (+)3.975e-11
Glyma.01G034800 hypothetical protein NA 1Chr01:3605528–3607302 (-)2.651e-14
Glyma.01G035100 hypothetical protein AT1G07420:SMO2-1:sterol 4-alpha-methyl-oxidase 2-1__AT2G29390:SMO2-2:sterol 4-alpha-methyl-oxidase 2-2 1Chr01:3634033–3639674 (+)4.901e-14
Glyma.01G036300 hypothetical protein NA 1Chr01:3813757–3814433 (+)3.428e-17
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)6.603e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.428e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)4.112e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2e-16
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.233e-18
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)7.179e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)7.179e-11
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)2.189e-11
Glyma.07G057600 hypothetical protein AT1G01430:TBL25:TRICHOME BIREFRINGENCE-LIKE 25 1Chr07:5110836–5114606 (-)5.305e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.837e-11
Glyma.09G187700 hypothetical protein AT3G24420:AT3G24420:alpha/beta-Hydrolases superfamily protein 1Chr09:41217358–41221592 (-)3.563e-11
Glyma.11G183200 hypothetical protein AT2G27500:AT2G27500:Glycosyl hydrolase superfamily protein 1Chr11:25070908–25075185 (-)2.028e-12
Glyma.11G183800 hypothetical protein AT5G22450:AT5G22450:spectrin beta chain, brain 1Chr11:25162867–25173439 (-)2.475e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)4.349e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.686e-13
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)2.047e-17
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.024e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.399e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.024e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.024e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)4.528e-12
Glyma.18G098900 hypothetical protein NA 1Chr18:10297476–10305043 (+)3.059e-11
Glyma.18G099000 hypothetical protein AT5G54920:AT5G54920:polyadenylate-binding protein interacting protein 1Chr18:10326925–10347143 (-)3.059e-11
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)2.278e-12
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)3.601e-12
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)2.278e-12
Glyma.18G100200 hypothetical protein NA 1Chr18:10512806–10522231 (+)2.278e-12
Glyma.18G100300 hypothetical protein NA 1Chr18:10523838–10534676 (+)3.449e-12