P25755
Metabolite ID
P25755
Deionized mass
670.3052 Da
Average m/z
671.3129
Average RT
14.7643
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
65
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
Loading GWAS records…
Loading Manhattan plot…
This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
Loading Q–Q plot…
Loading GWAS summary…
Associated genes
65 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.16G196800 | hypothetical protein | AT5G07250:RBL3:RHOMBOID-like protein 3 | 4 | Chr16:35831912–35835153 (+) | 2.244e-15 | |
| Glyma.16G196900 | hypothetical protein | NA | 4 | Chr16:35841279–35846894 (-) | 8.436e-18 | |
| Glyma.19G027000 | hypothetical protein | NA | 4 | Chr19:3335896–3343744 (+) | 1.62e-11 | |
| Glyma.19G026600 | hypothetical protein | AT4G13700:PAP23:purple acid phosphatase 23 | 2 | Chr19:3303658–3312907 (-) | 1.62e-11 | |
| Glyma.20G120200 | hypothetical protein | NA | 2 | Chr20:36268998–36282456 (-) | 9.069e-12 | |
| Glyma.01G174300 | hypothetical protein | NA | 1 | Chr01:51115502–51120201 (+) | 1.948e-11 | |
| Glyma.01G174600 | hypothetical protein | AT5G66740:AT5G66740:spindle assembly abnormal protein (DUF620) | 1 | Chr01:51138854–51141103 (+) | 1.948e-11 | |
| Glyma.03G031700 | hypothetical protein | AT1G79600:AT1G79600:Protein kinase superfamily protein | 1 | Chr03:3567906–3572939 (-) | 3.34e-12 | |
| Glyma.03G136100 | hypothetical protein | NA | 1 | Chr03:35199503–35203392 (-) | 3.776e-11 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr05:32014213–32017922 (-) | 3.871e-13 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 1 | Chr05:32021521–32025767 (-) | 6.563e-13 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 6.563e-13 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 2.245e-11 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 3.674e-11 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 3.674e-11 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 3.674e-11 | |
| Glyma.05G219200 | hypothetical protein | NA | 1 | Chr05:39875137–39879113 (-) | 8.465e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 4.068e-12 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 8.174e-14 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 8.426e-13 | |
| Glyma.07G129600 | hypothetical protein | AT4G29670:ACHT2:atypical CYS HIS rich thioredoxin 2 | 1 | Chr07:15404178–15410144 (-) | 6.177e-11 | |
| Glyma.08G016700 | hypothetical protein | AT1G63840:AT1G63840:RING/U-box superfamily protein | 1 | Chr08:1330226–1331366 (-) | 4.054e-20 | |
| Glyma.08G214500 | hypothetical protein | AT1G15740:AT1G15740:Leucine-rich repeat family protein | 1 | Chr08:17333345–17342698 (+) | 2.696e-11 | |
| Glyma.08G239500 | hypothetical protein | AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr08:20444715–20447665 (-) | 3.19e-12 | |
| Glyma.09G246700 | hypothetical protein | AT1G22840:CYTC-1:CYTOCHROME C-1 | 1 | Chr09:46835469–46838091 (-) | 5.015e-11 | |
| Glyma.09G268900 | hypothetical protein | NA | 1 | Chr09:48638803–48644136 (+) | 1.488e-12 | |
| Glyma.09G270200 | hypothetical protein | AT5G01020:AT5G01020:Protein kinase superfamily protein | 1 | Chr09:48725417–48728520 (-) | 4.719e-11 | |
| Glyma.09G270400 | hypothetical protein | NA | 1 | Chr09:48735991–48740879 (+) | 4.467e-12 | |
| Glyma.10G229600 | hypothetical protein | AT4G23630:BTI1:VIRB2-interacting protein 1 | 1 | Chr10:45968793–45973482 (-) | 1.503e-11 | |
| Glyma.10G265400 | hypothetical protein | AT2G01290:RPI2: | 1 | Chr10:48921268–48922795 (+) | 2.86e-12 | |
| Glyma.12G054700 | hypothetical protein | AT3G45140:LOX2:lipoxygenase 2 | 1 | Chr12:3949453–3957386 (-) | 2.085e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 2.14e-13 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 2.14e-13 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 4.798e-11 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 4.798e-11 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 4.037e-13 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 1 | Chr12:36473422–36498915 (+) | 4.037e-13 | |
| Glyma.12G204600 | hypothetical protein | AT4G28310:AT4G28310:microtubule-associated protein | 1 | Chr12:36504234–36505245 (+) | 5.782e-11 | |
| Glyma.12G205900 | hypothetical protein | NA | 1 | Chr12:36622011–36625824 (+) | 8.08e-11 | |
| Glyma.13G095000 | hypothetical protein | NA | 1 | Chr13:21005327–21006774 (-) | 6.237e-13 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 7.212e-11 | |
| Glyma.13G135700 | hypothetical protein | NA | 1 | Chr13:24812720–24818735 (+) | 7.212e-11 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 1 | Chr13:24820151–24823999 (-) | 7.212e-11 | |
| Glyma.14G068500 | hypothetical protein | NA | 1 | Chr14:5741909–5745574 (-) | 5.888e-11 | |
| Glyma.14G093100 | hypothetical protein | NA | 1 | Chr14:8654730–8655892 (-) | 4.291e-11 | |
| Glyma.16G182600 | hypothetical protein | AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 | 1 | Chr16:34364037–34367765 (-) | 8.889e-11 | |
| Glyma.16G189000 | hypothetical protein | NA | 1 | Chr16:35160485–35167548 (-) | 7.2e-13 | |
| Glyma.16G189100 | hypothetical protein | AT1G05190:emb2394:Ribosomal protein L6 family | 1 | Chr16:35170253–35173950 (-) | 1.318e-14 | |
| Glyma.16G196200 | HSF-32 | heat stress transcription factor 32 | AT5G62020:HSFB2A:heat shock transcription factor B2A | 1 | Chr16:35760178–35761852 (+) | 2.035e-14 |
| Glyma.16G196400 | hypothetical protein | AT5G07270:XBAT33:uncharacterized protein | 1 | Chr16:35782198–35790495 (-) | 4.474e-14 | |
| Glyma.16G207900 | hypothetical protein | AT5G08450:AT5G08450:zinc finger CCCH domain protein | 1 | Chr16:36754888–36763450 (+) | 4.336e-12 | |
| Glyma.16G208500 | EIF6 | AT3G55620:eIF6A:Translation initiation factor IF6 | 1 | Chr16:36806718–36809299 (+) | 3.757e-12 | |
| Glyma.17G049700 | hypothetical protein | AT5G35570:AT5G35570:O-fucosyltransferase family protein | 1 | Chr17:3775263–3781370 (+) | 6.402e-11 | |
| Glyma.18G057500 | hypothetical protein | AT2G30170:PBCP:Protein phosphatase 2C family protein | 1 | Chr18:5080060–5083756 (-) | 1.853e-11 | |
| Glyma.18G057600 | hypothetical protein | AT1G07020:AT1G07020:uncharacterized protein | 1 | Chr18:5084210–5084791 (+) | 1.853e-11 | |
| Glyma.18G057900 | hypothetical protein | NA | 1 | Chr18:5092695–5097651 (-) | 1.853e-11 | |
| Glyma.18G073500 | hypothetical protein | AT3G44730:KP1:kinesin-like protein 1 | 1 | Chr18:6971929–6982758 (+) | 8.217e-11 | |
| Glyma.18G111800 | hypothetical protein | AT1G32910:AT1G32910:HXXXD-type acyl-transferase family protein | 1 | Chr18:13278653–13284970 (+) | 2.442e-12 | |
| Glyma.18G112600 | hypothetical protein | NA | 1 | Chr18:13398219–13405422 (+) | 5.43e-11 | |
| Glyma.18G212700 | hypothetical protein | AT5G01820:SR1:serine/threonine protein kinase 1 | 1 | Chr18:49942123–49944169 (-) | 7.606e-12 | |
| Glyma.18G251900 | hypothetical protein | AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… | 1 | Chr18:53855786–53862322 (-) | 1.691e-11 | |
| Glyma.19G006900 | hypothetical protein | AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein | 1 | Chr19:686556–692466 (-) | 6.604e-13 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 5.778e-15 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 5.778e-15 | |
| Glyma.20G065100 | hypothetical protein | AT2G22330:CYP79B3:cytochrome P450, family 79, subfamily B, polypeptide 3 | 1 | Chr20:23009963–23012683 (+) | 4.734e-11 |