Overview Annotation GWAS Evidence Associated genes

P25713

Metabolite ID
P25713
Deionized mass
245.1388 Da
Average m/z
246.1466
Average RT
14.7559
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
28
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

28 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.17G215200 hypothetical protein NA 2Chr17:36125880–36142936 (+)1.719e-11
Glyma.02G006500 hypothetical protein AT4G01660:ABC1:ABC transporter 1 1Chr02:693193–700260 (+)8.046e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.804e-12
Glyma.03G169700 hypothetical protein AT2G20240:TRM17:GPI-anchored adhesin-like protein, putative (DUF3741)__AT4G28760:TRM20:methyl-coenzyme M reductase II s… 1Chr03:38442950–38448706 (+)1.846e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.584e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)6.298e-12
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)3.568e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)2.231e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)5.575e-11
Glyma.08G116400 hypothetical protein NA 1Chr08:8947598–8949573 (-)3.285e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)1.64e-12
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.94e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.249e-13
Glyma.15G152900 hypothetical protein AT4G15755:AT4G15755:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr15:12680146–12681864 (-)2.681e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)8.638e-11
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)5.584e-11
Glyma.17G189300 hypothetical protein NA 1Chr17:25644440–25649489 (-)2.465e-13
Glyma.17G212100 hypothetical protein NA 1Chr17:35010757–35014587 (+)1.719e-11
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)1.719e-11
Glyma.17G213300 hypothetical protein NA 1Chr17:35589559–35592664 (+)1.719e-11
Glyma.17G213600 hypothetical protein AT4G32060:AT4G32060:calcium-binding EF hand family protein 1Chr17:35740625–35746554 (-)1.719e-11
Glyma.17G213700 hypothetical protein AT5G11090:AT5G11090:serine-rich protein-like protein 1Chr17:35767502–35768989 (-)1.719e-11
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 1Chr17:36142245–36146771 (-)1.719e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)1.719e-11
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)4.894e-11
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)4.653e-11
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)4.894e-11
Glyma.18G100200 hypothetical protein NA 1Chr18:10512806–10522231 (+)4.894e-11