Overview Annotation GWAS Evidence Associated genes

P25600

Metabolite ID
P25600
Deionized mass
203.0933 Da
Average m/z
204.0999
Average RT
14.7309
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
22
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

22 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.74e-11
Glyma.01G022300 hypothetical protein NA 1Chr01:2215383–2217438 (+)7.933e-12
Glyma.03G173600 hypothetical protein AT3G53570:FC1:serine/threonine-protein kinase AFC1 1Chr03:38756369–38760896 (+)5.863e-11
Glyma.06G038700 hypothetical protein AT4G33360:FLDH:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:2935243–2937127 (+)8.221e-11
Glyma.06G038900 hypothetical protein AT5G42700:AT5G42700:AP2/B3-like transcriptional factor family protein 1Chr06:2943383–2947586 (+)3.984e-11
Glyma.06G039000 hypothetical protein AT1G47380:AT1G47380:Protein phosphatase 2C family protein 1Chr06:2949704–2954653 (+)2.505e-11
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 1Chr06:6068728–6071360 (+)1.166e-12
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)3.219e-13
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)8.839e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)8.839e-11
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)9.209e-11
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)9.209e-11
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)5.784e-13
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 1Chr07:6270176–6283087 (-)4.328e-12
Glyma.07G072700 hypothetical protein NA 1Chr07:6612725–6619961 (+)3.056e-11
Glyma.07G078300 hypothetical protein NA 1Chr07:7150800–7154478 (-)1.384e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)6.9e-12
Glyma.18G230600 hypothetical protein AT3G61250:MYB17:myb domain protein 17 1Chr18:51934101–51937216 (-)3.458e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)1.408e-14
Glyma.18G231500 hypothetical protein NA 1Chr18:52019138–52019828 (-)7.978e-13
Glyma.18G234900 hypothetical protein NA 1Chr18:52338841–52345036 (-)9.425e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)3.236e-11