Overview Annotation GWAS Evidence Associated genes

P25582

Metabolite ID
P25582
Deionized mass
549.2431 Da
Average m/z
550.2516
Average RT
14.7277
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
29
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

29 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)8.989e-13
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.733e-12
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)7.219e-12
Glyma.04G064500 hypothetical protein NA 2Chr04:5367346–5372857 (+)5.195e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)6.285e-14
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.473e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.473e-14
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)2.488e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.496e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.154e-14
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)6.055e-15
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)6.055e-15
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)6.055e-15
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)9.633e-15
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)8.989e-13
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)8.989e-13
Glyma.11G125600 hypothetical protein AT2G46200:AT2G46200:U11/U12 small nuclear ribonucleoprotein 1Chr11:9540747–9545520 (-)4.507e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.733e-12
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)5.143e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)8.124e-13
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)8.124e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.473e-14
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)1.768e-11
Glyma.16G147400 hypothetical protein NA 1Chr16:30817535–30821568 (+)1.293e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)7.83e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)3.785e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)4.432e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)4.432e-12
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)7.219e-12