Overview Annotation GWAS Evidence Associated genes

P25574

Metabolite ID
P25574
Deionized mass
527.2007 Da
Average m/z
528.2095
Average RT
14.7255
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
19
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

19 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G203300 hypothetical protein AT5G62230:ERL1:ERECTA-like 1 2Chr16:36437330–36445131 (+)1.434e-12
Glyma.03G136100 hypothetical protein NA 1Chr03:35199503–35203392 (-)8.239e-11
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.658e-14
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)7.883e-16
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)7.883e-16
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)8.758e-14
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)2.002e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.956e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.566e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)6.659e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)6.659e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)6.659e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)6.659e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)7.675e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.086e-11
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)6.44e-11
Glyma.14G204400 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr14:46936057–46943868 (-)6.536e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)1.002e-12
Glyma.18G106600 hypothetical protein NA 1Chr18:11947553–11951868 (+)5.977e-11