Overview Annotation GWAS Evidence Associated genes

P25424

Metabolite ID
P25424
Deionized mass
366.1679 Da
Average m/z
367.1747
Average RT
14.6858
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G176800 hypothetical protein AT5G06839:TGA10:bZIP transcription factor family protein 1Chr02:29019977–29028838 (-)1.05e-11
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)5.978e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.031e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.031e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.031e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.031e-11